RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 USB1Q9BQ65 265 aaKnown RBP10.12□□□□□ -0.79
PTCH1-203ENST00000375274 NAT8Q9UHE5 227 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 TRGV10A0A0A0MS01 117 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 DEFB108AA8MXU0 73 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 KLF4O43474 513 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 TNFSF15O95150 251 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 PMCHP20382 165 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 ERVS71-1P61550 626 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 FAM3AP98173 230 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 FOXO1Q12778 655 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 ZP4Q12836 540 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 CPEB3Q8NE35 698 aaKnown RBP10.12□□□□□ -0.79
PTCH1-203ENST00000375274 TLNRD1Q9H1K6 362 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 PARD6AQ9NPB6 346 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 NEUROG3Q9Y4Z2 214 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 SIPA1L1O43166 1804 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 IGLV1-36A0A0B4J1U3 117 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 M0R1B8 84 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 COX7A2P2O60397 106 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 CST2P09228 141 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 IFI6P09912 130 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 SMIM10L1P0DMW3 83 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 IGFBP7Q16270 282 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 SMIM10Q96HG1 83 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 Q9N2K0 584 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 SLC7A10Q9NS82 523 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 PRSS50Q9UI38 385 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 A0A1W2PR80 420 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 LAMTOR1Q6IAA8 161 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 SIRT7Q9NRC8 400 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 VAX2Q9UIW0 290 aa10.12□□□□□ -0.79
PTCH1-203ENST00000375274 THY1P04216 161 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 SPINK2P20155 84 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 BMP5P22003 454 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 G0S2P27469 103 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 CSN1S1P47710 185 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 NHLH2Q02577 135 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 FAM78BQ5VT40 261 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 WDR74Q6RFH5 385 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-203ENST00000375274 OR2M3Q8NG83 312 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 OR10A7Q8NGE5 316 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 OR2Y1Q8NGV0 311 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 A0A087X0M5 115 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 A0A1B0GX30 115 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 CDK2AP1O14519 115 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 HRASP01112 189 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 TMEM11P17152 192 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 VAMP3Q15836 100 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 APOBEC4Q8WW27 367 aaKnown RBP10.11□□□□□ -0.79
PTCH1-203ENST00000375274 ZNF385AQ96PM9 386 aaKnown RBP10.11□□□□□ -0.79
PTCH1-203ENST00000375274 LRFN3Q9BTN0 628 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 GPR87Q9BY21 358 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 ZNF835Q9Y2P0 537 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 ARL2-SNX15V9GYD0 113 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 SPINK4O60575 86 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 YIF1AO95070 293 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 ISG15P05161 165 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 IGHV4-34P06331 123 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 MMP7P09237 267 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-203ENST00000375274 CEBPEQ15744 281 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 FHL5Q5TD97 284 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 DYRK2Q92630 601 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 CNOT1A5YKK6 2376 aaKnown RBP10.11□□□□□ -0.79
PTCH1-203ENST00000375274 FCN1O00602 326 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 CCL3P10147 92 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 UBALD2Q8IYN6 164 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 OR2Z1Q8NG97 314 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 MRGPRDQ8TDS7 321 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-203ENST00000375274 SMDT1Q9H4I9 107 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 KIAA1456Q9P272 454 aa10.11□□□□□ -0.79
PTCH1-203ENST00000375274 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 TET1Q8NFU7 2136 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 SCN10AQ9Y5Y9 1956 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 DBX1A6NMT0 343 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-203ENST00000375274 TSPAN2O60636 221 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 FGF2P09038 288 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 IL11P20809 199 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 FOXL2P58012 376 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 GNB1P62873 340 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 RNF151Q2KHN1 245 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 SPINK9Q5DT21 86 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 TMEM9BQ9NQ34 198 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
PTCH1-203ENST00000375274 TDRD6O60522 2096 aaKnown RBP10.1□□□□□ -0.79
PTCH1-203ENST00000375274 IGHV3-43A0A0B4J1X8 118 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 A0A0G2JK05 382 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 C1QL1O75973 258 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 IGHV3-43DP0DP04 118 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 P2RY4P51582 365 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 MRGPRGQ86SM5 289 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-203ENST00000375274 MRGPRFQ96AM1 343 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 RCC2Q9P258 522 aaKnown RBP10.1□□□□□ -0.79
PTCH1-203ENST00000375274 LMX1BO60663 402 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms