RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 COLCA1Q6ZS62 124 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 CSNK2A3Q8NEV1 391 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 OR5M8Q8NGP6 311 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 FGFBP3Q8TAT2 258 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 MITD1Q8WV92 249 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 GSX1Q9H4S2 264 aaPredicted RBP7.11□□□□□ -1.27
UBR4-202ENST00000375224 IL36GQ9NZH8 169 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 COMMD9Q9P000 198 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 OR14J1Q9UGF5 321 aa7.11□□□□□ -1.27
UBR4-202ENST00000375224 CEACAM18A8MTB9 384 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 IGHV3-9P01782 118 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 LIPCP11150 499 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 IDH3GP51553 393 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 ZNF92Q03936 586 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 NANOS1Q8WY41 292 aaKnown RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 ZNF2Q9BSG1 426 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 EGLN1Q9GZT9 426 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 C20orf202A1L168 122 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 RAD51DO75771 328 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 DUS4LO95620 317 aaKnown RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 CD8AP01732 235 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 FABP4P15090 132 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 FPR2P25090 351 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 F2RL1P55085 397 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 SNU13P55769 128 aaKnown RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 RBX1P62877 108 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 PLEKHN1Q494U1 663 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 CHRFAM7AQ494W8 412 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 PLCXD3Q63HM9 321 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 IGF2-ASQ6U949 168 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 ZNF546Q86UE3 836 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 ZSCAN4Q8NAM6 433 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 ISOC2Q96AB3 205 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 APOBEC3DQ96AK3 386 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 GSKIPQ9P0R6 139 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 MED13Q9UHV7 2174 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 TEX13DA0A0J9YY54 714 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 A0A1W2PPH5 198 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 F5H0A9 414 aaPredicted RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 C2orf68Q2NKX9 166 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 TMEM128Q5BJH2 165 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 EIF5AL1Q6IS14 154 aaKnown RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 FAM24BQ8N5W8 94 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 OR5AP2Q8NGF4 316 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 PIGCQ92535 297 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 ST6GALNAC5Q9BVH7 336 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
UBR4-202ENST00000375224 GPR132Q9UNW8 380 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 MYO7BQ6PIF6 2116 aa7.1□□□□□ -1.27
UBR4-202ENST00000375224 LOC100509620A0A075B734 347 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 A0A0B4J2A0 478 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 OR5H1A6NKK0 313 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 GABRR1P24046 479 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 OR3A1P47881 315 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 PPP1R1AQ13522 171 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 MEX3BQ6ZN04 569 aaKnown RBP7.09□□□□□ -1.27
UBR4-202ENST00000375224 HSD17B11Q8NBQ5 300 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 MARCH1Q8TCQ1 289 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 WDYHV1Q96HA8 205 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 DEFB127Q9H1M4 99 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 ZNF552Q9H707 407 aaPredicted RBP7.09□□□□□ -1.27
UBR4-202ENST00000375224 ZDHHC11Q9H8X9 412 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 SHPKQ9UHJ6 478 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 LHX6Q9UPM6 363 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 CD79AP11912 226 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 RPA2P15927 270 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 AKR1C4P17516 323 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 DTYMKP23919 212 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 MPGP29372 298 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 TNFSF10P50591 281 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 CYCSP99999 105 aaKnown RBP7.09□□□□□ -1.27
UBR4-202ENST00000375224 SORDQ00796 357 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 OR5I1Q13606 314 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 DMRTC1Q5HYR2 192 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 DCAF12L2Q5VW00 463 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 MRPL21Q7Z2W9 205 aaKnown RBP7.09□□□□□ -1.27
UBR4-202ENST00000375224 OSR2Q8N2R0 312 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 MRGPRFQ96AM1 343 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 SNHG12Q9BXW3 62 aa7.09□□□□□ -1.27
UBR4-202ENST00000375224 RTTNQ86VV8 2226 aa7.09□□□□□ -1.28
UBR4-202ENST00000375224 A0A096LPE4 126 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 A0A1W2PPZ6 126 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 SLC22A20A6NK97 555 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 APLNRP35414 380 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 PMELP40967 661 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 PTTG1IPP53801 180 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 RAB1AP62820 205 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 VAMP2P63027 116 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 TGIF1Q15583 401 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 LY6G6FQ5SQ64 297 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 OR2A2Q6IF42 318 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 LHFPL1Q86WI0 220 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 GCNT2Q8N0V5 402 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 FAM216AQ8WUB2 273 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 EMG1Q92979 244 aaKnown RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 PHYHIPLQ96FC7 376 aa7.08□□□□□ -1.28
UBR4-202ENST00000375224 REPIN1Q9BWE0 567 aaKnown RBP7.08□□□□□ -1.28
UBR4-202ENST00000375224 EHFQ9NZC4 300 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms