RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SEC22AQ96IW7 307 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FAM25EA8MYX2 175 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IFNA7P01567 189 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HTR2BP41595 481 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FABP6P51161 128 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HERV-K104P61576 105 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MZT1Q08AG7 82 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IGSF11Q5DX21 431 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C11orf53Q8IXP5 236 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 GAPTQ8N292 157 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TOMM40LQ969M1 308 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 GALNT14Q96FL9 552 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 USB1Q9BQ65 265 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RSRP1Q9BUV0 290 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C1orf123Q9NWV4 160 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TUBD1Q9UJT1 453 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SPEF1Q9Y4P9 236 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 A0A0G2JNJ9 132 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C5orf51A6NDU8 294 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 H7C1Q1 480 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 M0R1B8 84 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SLC33A1O00400 549 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HSPB6O14558 160 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HS3ST1O14792 307 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 NXPH2O95156 264 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PPYP01298 95 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 GRPP07492 148 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF44P15621 663 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF250P15622 560 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 AADACP22760 399 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RBMXP38159 391 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PIGPP57054 158 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 NKX6-1P78426 367 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF345Q14585 488 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FIP1L1Q6UN15 594 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MOB1BQ7L9L4 216 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RDH5Q92781 318 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SNRNP40Q96DI7 357 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MFFQ9GZY8 342 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 NAA60Q9H7X0 242 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ELOVL5Q9NYP7 299 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 Q9UFV3 132 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TNFSF18Q9UNG2 199 aa15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RP1L1Q8IWN7 2480 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ATMQ13315 3056 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 BAHCC1Q9P281 2608 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 EEF1E1-BLOC1S5C9J1V9 151 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TUSC2O75896 110 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 OR2H2O95918 312 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CRYAAP02489 173 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TK1P04183 234 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 S100A1P23297 94 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 GLRXP35754 106 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FXYD4P59646 89 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HERPUD1Q15011 391 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ABCA11PQ4W5N1 156 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF546Q86UE3 836 aa15.24■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TEX13DA0A0J9YY54 714 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TMEM8BA6NDV4 472 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SH2D1BO14796 132 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF205O95201 554 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 DIRAS3O95661 229 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SCTP09683 121 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 BMP5P22003 454 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 HLA-DRB3P79483 266 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PAN3Q58A45 887 aaKnown RBP15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CCDC71LQ8N9Z2 235 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 OR4A4PQ8NGN8 299 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 VRK1Q99986 396 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CABLES2Q9BTV7 478 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TMEM165Q9HC07 324 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SLC2A9Q9NRM0 540 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RASL12Q9NYN1 266 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PRR13Q9NZ81 148 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 JKAMPQ9P055 326 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FZR1Q9UM11 496 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IGF2RP11717 2491 aa15.23■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PIEZO2Q9H5I5 2752 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 A0A0D9SG52 128 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C13orf42A0A1B0GVH6 325 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ADAP1O75689 374 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RP2O75695 350 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 OR2F2O95006 317 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PTBP3O95758 552 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IGHV3-13P01766 116 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FAM87AP0C7U9 286 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PSMB6P28072 239 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CCKARP32238 428 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CD200P41217 278 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 OR2F1Q13607 317 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 EXOSC2Q13868 293 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF497Q6ZNH5 498 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C20orf204Q6ZNR8 217 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 FAM185AQ8N0U4 392 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 LRTM2Q8N967 370 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RTN4IP1Q8WWV3 396 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C2orf50Q96LR7 162 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SYT3Q9BQG1 590 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SUCNR1Q9BXA5 334 aa15.22■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ARL6Q9H0F7 186 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms