RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FBXW12Q6X9E4 464 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 LYPD6BQ8NI32 183 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 DYRK2Q92630 601 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 GTF3AQ92664 365 aaKnown RBP11.99□□□□□ -0.49
HMGCL-203ENST00000374490 FER1L6-AS2Q96M78 137 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 GINS3Q9BRX5 216 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 RIMS4Q9H426 269 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-203ENST00000374490 SPACA1Q9HBV2 294 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF581Q9P0T4 197 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
HMGCL-203ENST00000374490 PCSK5Q92824 1860 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 AHCTF1Q8WYP5 2266 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 IGSF10Q6WRI0 2623 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 CDRT15L2A8MXV6 281 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 H7C2Y5 167 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 SIGLEC5O15389 551 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 PHF1O43189 567 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-203ENST00000374490 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-203ENST00000374490 TK1P04183 234 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 CD5P06127 495 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 MUC1P15941 1255 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-203ENST00000374490 ITGA3P26006 1051 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 DVL1P1P54792 670 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-203ENST00000374490 PRSS12P56730 875 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 GNMTQ14749 295 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 SP6Q3SY56 376 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 DCAF10Q5QP82 559 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 SPINK14Q6IE38 97 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 Q6ZRG5 221 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 OR5A2Q8NGI9 324 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 GLYATL2Q8WU03 294 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 APH1AQ96BI3 265 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 HIST1H2AAQ96QV6 131 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 Q9N2K0 584 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 LUZP4Q9P127 313 aa11.98□□□□□ -0.49
HMGCL-203ENST00000374490 C3orf85A0A1B0GTC6 90 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TRDCB7Z8K6 153 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TRAPPC2LH3BP13 241 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 MPPED1O15442 326 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 HEXAP06865 529 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PLA2G2AP14555 144 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PVALBP20472 110 aaPredicted RBP11.97□□□□□ -0.49
HMGCL-203ENST00000374490 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PLP2Q04941 152 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 OR1C1Q15619 314 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 LYZL2Q7Z4W2 148 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 FAM219AQ8IW50 185 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF565Q8N9K5 539 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 NAXEQ8NCW5 288 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PRRG4Q9BZD6 226 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TLNRD1Q9H1K6 362 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 KLF13Q9Y2Y9 288 aaPredicted RBP11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PRELID3BQ9Y3B1 194 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 FAM221AA4D161 298 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 NAPSAO96009 420 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 BCL3P20749 454 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 SRSF3P84103 164 aaKnown RBP11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PLGLB1Q02325 96 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 SRYQ05066 204 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 PEA15Q15121 130 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 BRICD5Q6PL45 260 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 MCEMP1Q8IX19 187 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TUSC5Q8IXB3 177 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TTTY12Q9BZ98 90 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TMEM222Q9H0R3 208 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 CALHM2Q9HA72 323 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 RCL1Q9Y2P8 373 aaKnown RBP11.97□□□□□ -0.49
HMGCL-203ENST00000374490 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
HMGCL-203ENST00000374490 DOCK10Q96BY6 2186 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 TRBV6-6A0A0A6YYG2 114 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 C5orf49A4QMS7 147 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 OR5B21A6NL26 309 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 KLK10O43240 276 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 TSPAN15O95858 294 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 IGHV3-9P01782 118 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 SFTA3P0C7M3 94 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 DANCRP0C864 163 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 SPP1P10451 314 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 MMP9P14780 707 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 S100GP29377 79 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 HAAOP46952 286 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 NPBWR2P48146 333 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 HFEQ30201 348 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 HPSE2Q8WWQ2 592 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 NANOS1Q8WY41 292 aaKnown RBP11.96□□□□□ -0.5
HMGCL-203ENST00000374490 IL22RA2Q969J5 263 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 ERGIC1Q969X5 290 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 SLAMF9Q96A28 289 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 SIGLEC12Q96PQ1 595 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 SMIM3Q9BZL3 60 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.5
HMGCL-203ENST00000374490 UBE2J1Q9Y385 318 aaPredicted RBP11.96□□□□□ -0.5
HMGCL-203ENST00000374490 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms