RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 HSD17B6O14756 317 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 SLC10A1Q14973 349 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 SULT1A2P50226 295 aa20.35■□□□□ 0.85
CDK9-201ENST00000373264 MDP1Q86V88 176 aa20.35■□□□□ 0.85
CDK9-201ENST00000373264 UCP3P55916 312 aa20.35■□□□□ 0.85
CDK9-201ENST00000373264 OR5P3Q8WZ94 311 aa20.35■□□□□ 0.85
CDK9-201ENST00000373264 SYT3Q9BQG1 590 aa20.35■□□□□ 0.85
CDK9-201ENST00000373264 CCL28Q9NRJ3 127 aa20.35■□□□□ 0.85
CDK9-201ENST00000373264 E5RGE8 158 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 SUMF2Q8NBJ7 301 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 MAGT1Q9H0U3 335 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 NSG2Q9Y328 171 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 SLC22A20A6NK97 555 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 NFYBP25208 207 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 ARR3P36575 388 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 KCNJ3P48549 501 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 CAV2P51636 162 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 ERVS71-1P61550 626 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 PLP2Q04941 152 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 BTNL8Q6UX41 500 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 DPPA2Q7Z7J5 298 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 SVBPQ8N300 66 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 UBALD1Q8TB05 177 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 WDYHV1Q96HA8 205 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 NRIP2Q9BQI9 281 aa20.34■□□□□ 0.85
CDK9-201ENST00000373264 RCC2Q9P258 522 aaKnown RBP20.34■□□□□ 0.85
CDK9-201ENST00000373264 KLF13Q9Y2Y9 288 aaPredicted RBP20.34■□□□□ 0.85
CDK9-201ENST00000373264 JTBO76095 146 aa20.33■□□□□ 0.85
CDK9-201ENST00000373264 COX5BP10606 129 aa20.33■□□□□ 0.85
CDK9-201ENST00000373264 SELEP16581 610 aa20.33■□□□□ 0.85
CDK9-201ENST00000373264 CD80P33681 288 aa20.33■□□□□ 0.85
CDK9-201ENST00000373264 HOXA4Q00056 320 aaPredicted RBP20.33■□□□□ 0.85
CDK9-201ENST00000373264 GCNT2Q8N0V5 402 aa20.33■□□□□ 0.85
CDK9-201ENST00000373264 GTF3C1Q12789 2109 aa20.33■□□□□ 0.85
CDK9-201ENST00000373264 KLRC4-KLRK1H3BQV0 150 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 CLN3Q13286 438 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 RNPS1Q15287 305 aaKnown RBP20.33■□□□□ 0.84
CDK9-201ENST00000373264 C10orf91Q5T1B1 145 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 IL34Q6ZMJ4 242 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 MKXQ8IYA7 352 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 ZFP62Q8NB50 900 aaPredicted RBP20.33■□□□□ 0.84
CDK9-201ENST00000373264 OR4D5Q8NGN0 318 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 OR1K1Q8NGR3 316 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 SAT2Q96F10 170 aaPredicted RBP20.33■□□□□ 0.84
CDK9-201ENST00000373264 TMEM222Q9H0R3 208 aa20.33■□□□□ 0.84
CDK9-201ENST00000373264 RYDENQ9NUL5 291 aaKnown RBP20.33■□□□□ 0.84
CDK9-201ENST00000373264 TRAV24A0A0B4J272 114 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 TPD52L2O43399 206 aaKnown RBP20.32■□□□□ 0.84
CDK9-201ENST00000373264 APLNRP35414 380 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 POLR2GP62487 172 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDK9-201ENST00000373264 HSD17B11Q8NBQ5 300 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 CLRN3Q8NCR9 226 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 LILRB1Q8NHL6 650 aaPredicted RBP20.32■□□□□ 0.84
CDK9-201ENST00000373264 HIST1H2AAQ96QV6 131 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 PLEKHA2Q9HB19 425 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 UBE2J1Q9Y385 318 aaPredicted RBP20.32■□□□□ 0.84
CDK9-201ENST00000373264 KIAA2026Q5HYC2 2103 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 TK1P04183 234 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 GAPDHP04406 335 aaKnown RBP20.32■□□□□ 0.84
CDK9-201ENST00000373264 GLAP06280 429 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 CXorf66Q5JRM2 361 aaPredicted RBP20.32■□□□□ 0.84
CDK9-201ENST00000373264 CCDC71LQ8N9Z2 235 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 OR5A2Q8NGI9 324 aa20.32■□□□□ 0.84
CDK9-201ENST00000373264 A0A1B0GV50 99 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 FAM24AA6NFZ4 105 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 RNASEK-C17orf49H0YIS7 233 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 ST8SIA3O43173 380 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 OMGP23515 440 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 ARG2P78540 354 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 ALKBH6Q3KRA9 238 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 UBAC2Q8NBM4 344 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 MRPL30Q8TCC3 161 aaKnown RBP20.31■□□□□ 0.84
CDK9-201ENST00000373264 BCL2L2Q92843 193 aaPredicted RBP20.31■□□□□ 0.84
CDK9-201ENST00000373264 PLSCR2Q9NRY7 297 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 SFTA3P0C7M3 94 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 ETV3LQ6ZN32 361 aa20.31■□□□□ 0.84
CDK9-201ENST00000373264 PURGQ9UJV8 347 aaKnown RBP20.31■□□□□ 0.84
CDK9-201ENST00000373264 CARHSP1Q9Y2V2 147 aaKnown RBP20.31■□□□□ 0.84
CDK9-201ENST00000373264 ANKRD30BLA7E2S9 258 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 EIF5AP63241 154 aaKnown RBP20.3■□□□□ 0.84
CDK9-201ENST00000373264 ZNF766Q5HY98 468 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 WDR86Q86TI4 376 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 SAXO1Q8IYX7 474 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 FBXO9Q9UK97 447 aaPredicted RBP20.3■□□□□ 0.84
CDK9-201ENST00000373264 TRDCB7Z8K6 153 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 ADAM20O43506 726 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 GPR137BO60478 399 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 PMELP40967 661 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 FBXW9Q5XUX1 488 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 EIF5AL1Q6IS14 154 aaKnown RBP20.3■□□□□ 0.84
CDK9-201ENST00000373264 PCSK4Q6UW60 755 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 SELENOHQ8IZQ5 122 aaKnown RBP20.3■□□□□ 0.84
CDK9-201ENST00000373264 ZNF565Q8N9K5 539 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 FER1L6-AS2Q96M78 137 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 RNF122Q9H9V4 155 aa20.3■□□□□ 0.84
CDK9-201ENST00000373264 TRGV5A0A0B4J1U4 118 aa20.29■□□□□ 0.84
CDK9-201ENST00000373264 FAM90A10PA6NDY2 464 aa20.29■□□□□ 0.84
CDK9-201ENST00000373264 FAM90A18PA6NE21 464 aa20.29■□□□□ 0.84
CDK9-201ENST00000373264 FAM90A16PA6NEW6 464 aa20.29■□□□□ 0.84
CDK9-201ENST00000373264 FAM90A20PA6NIJ5 464 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms