RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 IFITM10A6NMD0 228 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 SMAD4Q13485 552 aaKnown RBP13.77□□□□□ -0.2
CHST3-201ENST00000373115 PRNTQ86SH4 94 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 NTMQ9P121 344 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 VAX2Q9UIW0 290 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 LMO7DNF2Z398 122 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 CTSVO60911 334 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 NKX2-2O95096 273 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.2
CHST3-201ENST00000373115 COL19A1Q14993 1142 aa13.77□□□□□ -0.2
CHST3-201ENST00000373115 EAF1Q96JC9 268 aaPredicted RBP13.77□□□□□ -0.2
CHST3-201ENST00000373115 MDKP21741 143 aaPredicted RBP13.77□□□□□ -0.21
CHST3-201ENST00000373115 RPL34P49207 117 aaKnown RBP13.77□□□□□ -0.21
CHST3-201ENST00000373115 OR5R1Q8NH85 324 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 VSIG4Q9Y279 399 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 IGHV3OR15-7A0A075B7D8 119 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 CT62P0C5K7 136 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 ANKRD55Q3KP44 614 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 RNFT1Q5M7Z0 435 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 SYNGR2O43760 224 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 PNRC1Q12796 327 aaPredicted RBP13.77□□□□□ -0.21
CHST3-201ENST00000373115 ZNF707Q96C28 371 aaPredicted RBP13.77□□□□□ -0.21
CHST3-201ENST00000373115 OR6C3Q9NZP0 311 aa13.77□□□□□ -0.21
CHST3-201ENST00000373115 DEDDO75618 318 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 GABRG2P18507 467 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 CLDN18P56856 261 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 FOXO1Q12778 655 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 TMEM255AQ5JRV8 349 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 ZNF552Q9H707 407 aaPredicted RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 FRRS1LQ9P0K9 344 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 OOEPA6NGQ2 149 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 H3BQ15 152 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 C10orf113Q5VZT2 155 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 MRM2Q9UI43 246 aaKnown RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 MYO5AQ9Y4I1 1855 aaKnown RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 SMPD2O60906 423 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 F12P00748 615 aaPredicted RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 SNRPCP09234 159 aaKnown RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 TWIST1Q15672 202 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 ZNF770Q6IQ21 691 aaPredicted RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 C16orf82Q7Z2V1 217 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 ST6GAL2Q96JF0 529 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 SSC5DA1L4H1 1573 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 TAS2R60P59551 318 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 OR4A47Q6IF82 309 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 LDLRAD3Q86YD5 345 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 RASL11BQ9BPW5 248 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 PRR35P0CG20 571 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 GALP22466 123 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 TMEM108Q6UXF1 575 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 C7orf77A4D0Y5 90 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 HAND1O96004 215 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 PKIAP61925 76 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 LBHQ53QV2 105 aaPredicted RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 SLC23A3Q6PIS1 610 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 ANGPTL4Q9BY76 406 aa13.76□□□□□ -0.21
CHST3-201ENST00000373115 ZNF71Q9NQZ8 489 aaPredicted RBP13.76□□□□□ -0.21
CHST3-201ENST00000373115 M0QZK8 103 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
CHST3-201ENST00000373115 SLC25A30Q5SVS4 291 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 TP53I13Q8NBR0 393 aaPredicted RBP13.75□□□□□ -0.21
CHST3-201ENST00000373115 MRPL24Q96A35 216 aaKnown RBP13.75□□□□□ -0.21
CHST3-201ENST00000373115 MRGPRFQ96AM1 343 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 SERGEFQ9UGK8 458 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 MFSD2BA6NFX1 497 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 SLC35E3Q7Z769 313 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 SOSTQ9BQB4 213 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 FSCN3Q9NQT6 498 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 CCL28Q9NRJ3 127 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 ZNF250P15622 560 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 PIGYQ3MUY2 71 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 CTSDP07339 412 aaPredicted RBP13.75□□□□□ -0.21
CHST3-201ENST00000373115 PMELP40967 661 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 SLC35B1P78383 322 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 GPR61Q9BZJ8 451 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
CHST3-201ENST00000373115 TRAV39A0A0B4J263 110 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 LGALSLQ3ZCW2 172 aaPredicted RBP13.75□□□□□ -0.21
CHST3-201ENST00000373115 CBLN3Q6UW01 205 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 LINC01555Q8NAE3 123 aa13.75□□□□□ -0.21
CHST3-201ENST00000373115 LINC01387J3KSC0 135 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 CA2P00918 260 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
CHST3-201ENST00000373115 GABRG3Q99928 467 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 R4GN57 208 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 TMIGD3P0DMS9 266 aaPredicted RBP13.74□□□□□ -0.21
CHST3-201ENST00000373115 CEACAM3P40198 252 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 RAG2P55895 527 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 EWSR1Q01844 656 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHST3-201ENST00000373115 ACER2Q5QJU3 275 aa13.74□□□□□ -0.21
CHST3-201ENST00000373115 BHLHA15Q7RTS1 189 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms