RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 SLC35D1Q9NTN3 355 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 GOLGB1Q14789 3259 aaKnown RBP9.17□□□□□ -0.94
NUP188-201ENST00000372577 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 ADAP1O75689 374 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 SPP1P10451 314 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 RHOBP62745 196 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 P2RY6Q15077 328 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 PCM1Q15154 2024 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 CEACAM21Q3KPI0 293 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 LAIR2Q6ISS4 152 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 RAB1CQ92928 201 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 HS3ST3B1Q9Y662 390 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 NINQ8N4C6 2090 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 ANKRD36A6QL64 1941 aa9.17□□□□□ -0.94
NUP188-201ENST00000372577 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 LANCL1O43813 399 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 ZNF883P0CG24 379 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 EFNB2P52799 333 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 RNF212Q495C1 297 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 TSPO2Q5TGU0 170 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 ETV3LQ6ZN32 361 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 RND1Q92730 232 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 FAM96BQ9Y3D0 163 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 CNTRLQ7Z7A1 2325 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 TIMM9Q9Y5J7 89 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 CHEK1O14757 476 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 COX6A1P12074 109 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 PSG4Q00888 419 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 PNRC1Q12796 327 aaPredicted RBP9.16□□□□□ -0.94
NUP188-201ENST00000372577 RFLNBQ8N5W9 214 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 OR1L4Q8NGR5 311 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 CA5BP1Q8WTZ4 195 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 DIRC2Q96SL1 478 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 KLK13Q9UKR3 277 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 RAB5AP20339 215 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 GNB2P62879 340 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 PCOLCEQ15113 449 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 TIPARPQ7Z3E1 657 aaKnown RBP9.16□□□□□ -0.94
NUP188-201ENST00000372577 RFESDQ8TAC1 157 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 SLC25A40Q8TBP6 338 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 RNF122Q9H9V4 155 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 MANBALQ9NQG1 85 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 AHRRA9YTQ3 701 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 G3V3Q6 166 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 MMP9P14780 707 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
NUP188-201ENST00000372577 KRTCAP3Q53RY4 240 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 MDP1Q86V88 176 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 GAPTQ8N292 157 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 TMEM104Q8NE00 496 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 GINS3Q9BRX5 216 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 GHITMQ9H3K2 345 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 ZNF665Q9H7R5 613 aa9.16□□□□□ -0.94
NUP188-201ENST00000372577 DVL1O14640 695 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 CDIPTO14735 213 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 YIF1AO95070 293 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 PRF1P14222 555 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 FGF12P61328 243 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 MRPS11P82912 194 aaKnown RBP9.15□□□□□ -0.94
NUP188-201ENST00000372577 NAAAQ02083 359 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 TCTEX1D1Q8N7M0 179 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 TMEM18Q96B42 140 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 SEBOXQ9HB31 216 aaPredicted RBP9.15□□□□□ -0.94
NUP188-201ENST00000372577 FZR1Q9UM11 496 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 NPIPB9F8W1W9 429 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 CDK2AP1O14519 115 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 CBR1P16152 277 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 BMI1P35226 326 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 CDC34P49427 236 aaPredicted RBP9.15□□□□□ -0.94
NUP188-201ENST00000372577 ZNF260Q3ZCT1 412 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 LINC01590Q5TEZ4 76 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 TMEM251Q8N6I4 163 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 R3HDM4Q96D70 268 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 MRPL22Q9NWU5 206 aaKnown RBP9.15□□□□□ -0.94
NUP188-201ENST00000372577 CRYM-AS1A6NIL9 109 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 CLDN34H7C241 214 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 J3QW42 95 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 CLEC3BP05452 202 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 IL11P20809 199 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 GNG10P50151 68 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 BATFQ16520 125 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 LGALSLQ3ZCW2 172 aaPredicted RBP9.15□□□□□ -0.94
NUP188-201ENST00000372577 HIKESHIQ53FT3 197 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 DPPA3Q6W0C5 159 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 ACY3Q96HD9 319 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 MS4A5Q9H3V2 200 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 SH2D2AQ9NP31 389 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 SPAG17Q6Q759 2223 aa9.15□□□□□ -0.94
NUP188-201ENST00000372577 SCN3AQ9NY46 2000 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 IGKV3D-11A0A0A0MRZ8 115 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 SFTPCP11686 197 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 HLA-GP17693 338 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 TMEM241Q24JQ0 296 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 C10orf128Q5T292 105 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 ABHD14BQ96IU4 210 aa9.15□□□□□ -0.95
NUP188-201ENST00000372577 SPSB2Q99619 263 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms