RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 SERPINE3A8MV23 424 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 C11orf94C9JXX5 98 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 RER1O15258 196 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 SLC25A6P12236 298 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 COX5AP20674 150 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 GCH1P30793 250 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 MRPL58Q14197 206 aaKnown RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 SPINK9Q5DT21 86 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 DCAF10Q5QP82 559 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 FBXL14Q8N1E6 418 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 D2HGDHQ8N465 521 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 OR4B1Q8NGF8 309 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 PATE1Q8WXA2 126 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 NEIL1Q96FI4 390 aaPredicted RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 MENTQ9BUN1 341 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 ST3GAL6Q9Y274 331 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 LOC102723971A0A1B0GUV8 181 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 J3QR89 54 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 HS3ST1O14792 307 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 SNAI2O43623 268 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 ZIC2O95409 532 aaPredicted RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 CST6Q15828 149 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 CDKN3Q16667 212 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 FFAR4Q5NUL3 377 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 MRGPRGQ86SM5 289 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 C12orf76Q8N812 135 aaPredicted RBP10.35□□□□□ -0.75
PTPN1-201ENST00000371621 OR1N1Q8NGS0 311 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 RDH5Q92781 318 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 WDR34Q96EX3 536 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 ANXA10Q9UJ72 324 aa10.35□□□□□ -0.75
PTPN1-201ENST00000371621 MYOFQ9NZM1 2061 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 CBR3O75828 277 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 SLC35E2P0CK97 266 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 CTSSP25774 331 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 UCP2P55851 309 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 PLP1P60201 277 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 VWA1Q6PCB0 445 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 NIT1Q86X76 327 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 C11orf40Q8WZ69 217 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 SLC46A1Q96NT5 459 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 RNF2Q99496 336 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 WDR61Q9GZS3 305 aaKnown RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 TBX21Q9UL17 535 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 MRPS2Q9Y399 296 aaKnown RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 TNS1Q9HBL0 1735 aaKnown RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 FANCMQ8IYD8 2048 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 M0R2Z0 102 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 NEURL1O76050 574 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 NRASP01111 189 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 KRASP01116 189 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 IGHG1P01857 330 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 CTSDP07339 412 aaPredicted RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 ZNF735P0CB33 412 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 SPTBN1Q01082 2364 aaKnown RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 TPTE2P1Q5T6R2 138 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 OR10G4Q8NGN3 311 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 OR10G9Q8NGN4 311 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 OR10G7Q8NGN6 311 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 OR5B3Q8NH48 314 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 OR2AE1Q8NHA4 323 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 SMPD2O60906 423 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 CER1O95813 267 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 IL2RAP01589 272 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 CD55P08174 381 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 MPZP25189 248 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 P2RY2P41231 377 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 RPS21P63220 83 aaKnown RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 MEF2BQ02080 365 aaPredicted RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 TCEAL8Q8IYN2 117 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 AQP3Q92482 292 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 PINX1Q96BK5 328 aaKnown RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 CDCA3Q99618 268 aaPredicted RBP10.34□□□□□ -0.75
PTPN1-201ENST00000371621 TIMP4Q99727 224 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 ENY2Q9NPA8 101 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 OR1A1Q9P1Q5 309 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 B3GAT1Q9P2W7 334 aa10.34□□□□□ -0.75
PTPN1-201ENST00000371621 ROS1P08922 2347 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 WNK2Q9Y3S1 2297 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 HRKO00198 91 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 HCRTR1O43613 425 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF133P52736 654 aaPredicted RBP10.33□□□□□ -0.76
PTPN1-201ENST00000371621 EMC4Q5J8M3 183 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 C9orf135Q5VTT2 229 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 FAM69BQ5VUD6 431 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 SPTSSAQ969W0 71 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 CACNG5Q9UF02 275 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF107Q9UII5 783 aaPredicted RBP10.33□□□□□ -0.76
PTPN1-201ENST00000371621 J3QRE1 110 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 KLF4O43474 513 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 NUDT3O95989 172 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 ARL3P36405 182 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 HIST3H3Q16695 136 aa10.33□□□□□ -0.76
PTPN1-201ENST00000371621 RIPPLY2Q5TAB7 128 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms