RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 WIPI2Q9Y4P8 454 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 DUS4LO95620 317 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 HOXB1P14653 301 aaPredicted RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 CBR1P16152 277 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 NUBP1P53384 320 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 ZNF90Q03938 601 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 MGAT2Q10469 447 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 ADAT3Q96EY9 351 aaPredicted RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 SMIM7Q9BQ49 75 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 ZMIZ1Q9ULJ6 1067 aa12.86□□□□□ -0.35
NDC1-201ENST00000371429 LSM2Q9Y333 95 aaKnown RBP12.86□□□□□ -0.35
NDC1-201ENST00000371429 TOX4O94842 621 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 FAM87AP0C7U9 286 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 METTL15P1P0C7V9 234 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 FUT5Q11128 374 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
NDC1-201ENST00000371429 RELL2Q8NC24 303 aaPredicted RBP12.85□□□□□ -0.35
NDC1-201ENST00000371429 R3HDM4Q96D70 268 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 OR1A1Q9P1Q5 309 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 TRAV8-7A0A075B6U6 113 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 TAGLNQ01995 201 aaKnown RBP12.85□□□□□ -0.35
NDC1-201ENST00000371429 AESQ08117 197 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 OR2V2Q96R30 315 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 NUDT16L1Q9BRJ7 211 aaKnown RBP12.85□□□□□ -0.35
NDC1-201ENST00000371429 RNF115Q9Y4L5 304 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 OR5H1A6NKK0 313 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 PRDX2P32119 198 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 PRSS53Q2L4Q9 553 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 FNDC7Q5VTL7 733 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 GGNBP1Q5YKI7 109 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 CHRDL1Q9BU40 450 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 GPR179Q6PRD1 2367 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 SERTM2A0A1B0GWG4 89 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 PPP5D1E7EU14 171 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 PGA4P0DJD7 388 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 IGLV3-21P80748 117 aaPredicted RBP12.85□□□□□ -0.35
NDC1-201ENST00000371429 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
NDC1-201ENST00000371429 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 TTRP02766 147 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 NDUFA6P56556 154 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 DOLPP1Q86YN1 238 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 ZBTB44Q8NCP5 570 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 MIA3Q5JRA6 1907 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 C19orf57Q0VDD7 668 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 RPL7L1Q6DKI1 246 aaKnown RBP12.84□□□□□ -0.35
NDC1-201ENST00000371429 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 ZNF488Q96MN9 340 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 AKIRIN1Q9H9L7 192 aaPredicted RBP12.84□□□□□ -0.35
NDC1-201ENST00000371429 ZNF629Q9UEG4 869 aaPredicted RBP12.84□□□□□ -0.35
NDC1-201ENST00000371429 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
NDC1-201ENST00000371429 TMEM208Q9BTX3 173 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 C9orf170A2RU37 121 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 BATFQ16520 125 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 RIPPLY2Q5TAB7 128 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 CCL13Q99616 98 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 PIPOXQ9P0Z9 390 aa12.84□□□□□ -0.35
NDC1-201ENST00000371429 ARPC4-TTLL3A0A0A6YYG9 625 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 ATP6V1G2-DDX39BF2Z307 99 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 H0Y8G0 127 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 CTSDP07339 412 aaPredicted RBP12.83□□□□□ -0.35
NDC1-201ENST00000371429 VSIG8P0DPA2 414 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 HOXA6P31267 233 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 OR1K1Q8NGR3 316 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 ITLN1Q8WWA0 313 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 NTNG2Q96CW9 530 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 ABHD17AQ96GS6 310 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 RNF122Q9H9V4 155 aa12.83□□□□□ -0.35
NDC1-201ENST00000371429 A0A0U1RQV5 110 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 BCL2L11O43521 198 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 ZNF260Q3ZCT1 412 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 TBC1D26Q86UD7 250 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 DHRS9Q9BPW9 319 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 SF3B6Q9Y3B4 125 aaKnown RBP12.83□□□□□ -0.36
NDC1-201ENST00000371429 ZNHIT1O43257 154 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 TXNDC12O95881 172 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 HLA-DRB3P79483 266 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 ZXDCQ2QGD7 858 aaPredicted RBP12.83□□□□□ -0.36
NDC1-201ENST00000371429 AVPI1Q5T686 147 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 BCL2L2Q92843 193 aaPredicted RBP12.83□□□□□ -0.36
NDC1-201ENST00000371429 HARBI1Q96MB7 349 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 KCNK17Q96T54 332 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 TIMP4Q99727 224 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 DBX1A6NMT0 343 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 DCTN6O00399 190 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 PPYP01298 95 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 GZMKP49863 264 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 MMDQ15546 238 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 LINC00596Q86U02 117 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 OR5C1Q8NGR4 320 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 KCNE5Q9UJ90 142 aa12.83□□□□□ -0.36
NDC1-201ENST00000371429 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms