RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CLUHP3Q96NS8 147 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ALKBH7Q9BT30 221 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 HRH4Q9H3N8 390 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 NOX4Q9NPH5 578 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 PLA2G3Q9NZ20 509 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 MRPL27Q9P0M9 148 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 A0A087WZY1 265 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 A0A0G2JNJ9 132 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 A0A1B0GWA3 101 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 UMAD1C9J7I0 102 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 FTCDNL1E5RQL4 147 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 RCBTB2O95199 551 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 OR4A8P0C604 315 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 OR2T7P0C7T2 308 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CYCSP99999 105 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 PMP22Q01453 160 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 PLCXD2Q0VAA5 305 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 DHRS2Q13268 280 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CDK5R1Q15078 307 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 VWA1Q6PCB0 445 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 MEX3BQ6ZN04 569 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 LYG2Q86SG7 212 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CATSPERDQ86XM0 798 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 OR4K13Q8NH42 304 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 DAZLQ92904 295 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 IMMP2LQ96T52 175 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CHST6Q9GZX3 395 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 Q9UFV3 132 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 DKKL1Q9UK85 242 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 DUS4LO95620 317 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 OR8U9P0C7N5 309 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 RAB7AP51149 207 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 CCL11P51671 97 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ACSF3Q4G176 576 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 RPS19BP1Q86WX3 136 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 C20orf196Q8IYI0 205 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 SYS1Q8N2H4 156 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM106AQ96A25 262 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 MRPL15Q9P015 296 aaKnown RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 KLHL13Q9P2N7 655 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 B3GAT1Q9P2W7 334 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 C19orf25Q9UFG5 118 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 OR5V1Q9UGF6 321 aa5.93□□□□□ -1.46
CSDE1-204ENST00000369530 RP1L1Q8IWN7 2480 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-204ENST00000369530 ZC3H12DA2A288 527 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 C2orf72A6NCS6 295 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SS18L1O75177 396 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CST4P01036 141 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 TRGC2P03986 189 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 OTX2P32243 289 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 FGF8P55075 233 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 UBE2MP61081 183 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CD226Q15762 336 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 HIST3H3Q16695 136 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 NIPAL3Q6P499 406 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 UNQ6126/PRO20091Q6UXV3 157 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 WDR88Q6ZMY6 472 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 MBOAT2Q6ZWT7 520 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF550Q7Z398 422 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CXorf67Q86X51 503 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 TGIF2LYQ8IUE0 185 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 FOXRED2Q8IWF2 684 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 GPX8Q8TED1 209 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SMIM19Q96E16 107 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 TNFRSF13CQ96RJ3 184 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 FAM173AQ9BQD7 235 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 C20orf141Q9NUB4 165 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 PRRC2AP48634 2157 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 LOC102725191A0A1B0GVB3 256 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 DAPL1A0PJW8 107 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 RAB27BO00194 218 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 DCTN6O00399 190 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 HLA-DQA2P01906 255 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 LCATP04180 440 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 DANCRP0C864 163 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CDK2P24941 298 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CHATP28329 748 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CD34P28906 385 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 OR10J1P30954 320 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 MEOX1P50221 254 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CEBPGP53567 150 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 UBE2G2P60604 165 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF674Q2M3X9 581 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 RNASE12Q5GAN4 147 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM69Q5SWH9 247 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 COLCA1Q6ZS62 124 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 CENPVQ7Z7K6 275 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-204ENST00000369530 OR5D18Q8NGL1 313 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 ZNF671Q8TAW3 534 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SLC35E1Q96K37 410 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 RNF2Q99496 336 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SLITRK2Q9H156 845 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 PLEKHF2Q9H8W4 249 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 SLC5A6Q9Y289 635 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 MED12Q93074 2177 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 TMEM235A6NFC5 223 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 DHRS7CA6NNS2 312 aa5.92□□□□□ -1.46
CSDE1-204ENST00000369530 C11orf98E9PRG8 122 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms