RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ISG15P05161 165 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 CSN2P05814 226 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 SNRNP70P08621 437 aaKnown RBP8.21□□□□□ -1.1
CLRN3-201ENST00000368671 HCKP08631 526 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 GLP1RP43220 463 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 BNIP1Q12981 228 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 LTC4SQ16873 150 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 Q6P435 159 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 ZNF329Q86UD4 541 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 OR56B4Q8NH76 319 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 OR9G1Q8NH87 305 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 RPEQ96AT9 228 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 RNFT2Q96EX2 444 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 HRASLS5Q96KN8 279 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 IMPAD1Q9NX62 359 aa8.21□□□□□ -1.1
CLRN3-201ENST00000368671 A0A087X0M5 115 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 A0A1B0GX30 115 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 NUDT19A8MXV4 375 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 OOSP1A8MZH6 123 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 H0YJX3 145 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 J3QLW9 94 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 SLC16A6O15403 523 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 CCDC159P0C7I6 412 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 TMEM225BP0DP42 221 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 FCGR1AP12314 374 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 ZNF19P17023 458 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 TMEM11P17152 192 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 GNG10P50151 68 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 CD69Q07108 199 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 HES1Q14469 280 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 C1orf146Q5VVC0 180 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 ETV3LQ6ZN32 361 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 KCTD20Q7Z5Y7 419 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
CLRN3-201ENST00000368671 SAXO1Q8IYX7 474 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 CHST4Q8NCG5 386 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 LEAP2Q969E1 77 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 KIRREL1Q96J84 757 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 C4orf36Q96KX1 117 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 NOL4LQ96MY1 436 aaPredicted RBP8.2□□□□□ -1.1
CLRN3-201ENST00000368671 NR1H4Q96RI1 486 aaPredicted RBP8.2□□□□□ -1.1
CLRN3-201ENST00000368671 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 ZCCHC4Q9H5U6 513 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 OR6C3Q9NZP0 311 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 LINC00527Q9UJ94 153 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 OAZ3Q9UMX2 235 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 MYRFQ9Y2G1 1151 aa8.2□□□□□ -1.1
CLRN3-201ENST00000368671 AMMECR1Q9Y4X0 333 aaPredicted RBP8.2□□□□□ -1.1
CLRN3-201ENST00000368671 MEIKINA0A087WXM9 373 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 KBTBD11-OT1A0A1B0GTJ5 212 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 SERPINE3A8MV23 424 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 J3QR06 171 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 MT-ND2P03891 347 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 DBTP11182 482 aaKnown RBP8.19□□□□□ -1.1
CLRN3-201ENST00000368671 THBS3P49746 956 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 CCR9P51686 369 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
CLRN3-201ENST00000368671 EGFEM1PQ0D2K5 195 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 ALKBH1Q13686 389 aaKnown RBP8.19□□□□□ -1.1
CLRN3-201ENST00000368671 DIAPH2-AS1Q14236 149 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 HNF4GQ14541 408 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 CDK5R1Q15078 307 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 PAN3Q58A45 887 aaKnown RBP8.19□□□□□ -1.1
CLRN3-201ENST00000368671 LPCAT4Q643R3 524 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 DRAM1Q8N682 238 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 C5orf56Q8N8D9 126 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 KLHL30-AS1Q8NEE0 82 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 OR13A1Q8NGR1 328 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 PELI1Q96FA3 418 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 OSBPL10Q9BXB5 764 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 RHOFQ9HBH0 211 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 PCDHB16Q9NRJ7 776 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 CALYQ9NYX4 217 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 IDI2-AS1Q9NZ38 188 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 KIF25Q9UIL4 384 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 DNAH3Q8TD57 4116 aa8.19□□□□□ -1.1
CLRN3-201ENST00000368671 A0A1W2PPI3 338 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A18PA6NE21 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A16PA6NEW6 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A20PA6NIJ5 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 OR4C45A6NMZ5 311 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A9PA6NNJ1 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A12PA8MX19 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A5PA8MXJ8 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 J3QRE1 110 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 SULT1B1O43704 296 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 IGKV1D-33P01593 117 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 IGKV1-33P01594 117 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 GSTP1P09211 210 aaKnown RBP8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A15PP0C7V4 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A13PP0C7W8 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A14PP0C7W9 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 FAM90A24PP0C7X0 464 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 C21orf33P30042 268 aaPredicted RBP8.18□□□□□ -1.1
CLRN3-201ENST00000368671 MTNR1BP49286 362 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 ZP1P60852 638 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms