RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 TMEM225BP0DP42 221 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 GABRB1P18505 474 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 OR3A4PP47883 348 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 MTNR1BP49286 362 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 OSR2Q8N2R0 312 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 ZNF565Q8N9K5 539 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 ZNF649Q9BS31 505 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 ALG8Q9BVK2 526 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
CKS1B-202ENST00000368436 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 ING3Q9NXR8 418 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 ORC6Q9Y5N6 252 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 TRAV24A0A0B4J272 114 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 H0YJX3 145 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 J3QR06 171 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 EI24O14681 340 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 ZFPL1O95159 310 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 HCKP08631 526 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 NFYBP25208 207 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 PAX5Q02548 391 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 GALEQ14376 348 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 RBM39Q14498 530 aaKnown RBP12.71□□□□□ -0.37
CKS1B-202ENST00000368436 ZIK1Q3SY52 487 aaPredicted RBP12.71□□□□□ -0.37
CKS1B-202ENST00000368436 ZNF691Q5VV52 312 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 LHFPL3Q86UP9 236 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 LINC00482Q8N8I6 264 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 PXT1Q8NFP0 134 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 PYDC1Q8WXC3 89 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
CKS1B-202ENST00000368436 MYCBPQ99417 103 aaPredicted RBP12.71□□□□□ -0.37
CKS1B-202ENST00000368436 AASSQ9UDR5 926 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 KIF25Q9UIL4 384 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 MOB4Q9Y3A3 225 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.37
CKS1B-202ENST00000368436 HSPE1-MOB4S4R3N1 261 aa12.71□□□□□ -0.37
CKS1B-202ENST00000368436 PSMB11A5LHX3 300 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 TMEM212A6NML5 194 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 NPIPB11E5RHQ5 1161 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 E9PI62 339 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 CIB2O75838 187 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 CLIC3O95833 236 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
CKS1B-202ENST00000368436 C21orf33P30042 268 aaPredicted RBP12.7□□□□□ -0.38
CKS1B-202ENST00000368436 ALDH3A2P51648 485 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
CKS1B-202ENST00000368436 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
CKS1B-202ENST00000368436 C9orf152Q5JTZ5 239 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 ZNF529Q6P280 563 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 Q8NFD4 153 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 OR13A1Q8NGR1 328 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 CNIH3Q8TBE1 160 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 TOMM40LQ969M1 308 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 RPEQ96AT9 228 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 BARHL1Q9BZE3 327 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 CALYQ9NYX4 217 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 IDI2-AS1Q9NZ38 188 aa12.7□□□□□ -0.38
CKS1B-202ENST00000368436 MEIKINA0A087WXM9 373 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 A0A1W2PPI3 338 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 IL1AP01583 271 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 GLP1RP43220 463 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 IL13RA2Q14627 380 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 RSBN1Q5VWQ0 802 aaPredicted RBP12.69□□□□□ -0.38
CKS1B-202ENST00000368436 ASCL4Q6XD76 172 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 ETV3LQ6ZN32 361 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 OR10A7Q8NGE5 316 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 LEAP2Q969E1 77 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 NR1H4Q96RI1 486 aaPredicted RBP12.69□□□□□ -0.38
CKS1B-202ENST00000368436 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 DHDHQ9UQ10 334 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 PSG11Q9UQ72 335 aa12.69□□□□□ -0.38
CKS1B-202ENST00000368436 H3BNX3 289 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 GABRPO00591 440 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 HSPB6O14558 160 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 FGF16O43320 207 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 FADS2O95864 444 aaKnown RBP12.68□□□□□ -0.38
CKS1B-202ENST00000368436 CCDC159P0C7I6 412 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 KCNJ3P48549 501 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 RAB7AP51149 207 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 MADCAM1Q13477 382 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 VAX1Q5SQQ9 334 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 MRPL41Q8IXM3 137 aaKnown RBP12.68□□□□□ -0.38
CKS1B-202ENST00000368436 OR8H3Q8N146 312 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 DRAM1Q8N682 238 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 C5orf56Q8N8D9 126 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 OR56B4Q8NH76 319 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 PLPPR1Q8TBJ4 325 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 HAVCR2Q8TDQ0 301 aa12.68□□□□□ -0.38
CKS1B-202ENST00000368436 CPNE2Q96FN4 548 aaPredicted RBP12.68□□□□□ -0.38
CKS1B-202ENST00000368436 PDCD1LG2Q9BQ51 273 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms