RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ASB5Q8WWX0 329 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 FBXL17Q9UF56 701 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 ANKRD20A5PA0PJZ0 165 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 OR2C3Q8N628 320 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 CCL13Q99616 98 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 CLN8Q9UBY8 286 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 MYO16Q9Y6X6 1858 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 MPC2O95563 127 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 PPP1CCP36873 323 aaKnown RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 DUSP18Q8NEJ0 188 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 A0A1W2PNV4 684 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 C4orf51C9J302 202 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 MS4A18H0YCH9 400 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 CPN1P15169 458 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 BMI1P35226 326 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 CDC34P49427 236 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 TPPP2P59282 170 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 MS4A18Q3C1V0 323 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 TGIF2LYQ8IUE0 185 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 SAP25Q8TEE9 199 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 TMEM171Q8WVE6 324 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 SLC25A10Q9UBX3 287 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-207ENST00000368226 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
PTPRK-207ENST00000368226 C17orf51A8MQB3 221 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 SPP1P10451 314 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 GNG4P50150 75 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 CLEC18BQ6UXF7 455 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 LY86O95711 162 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 COMMD1Q8N668 190 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 FOXJ2Q9P0K8 574 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.6
PTPRK-207ENST00000368226 GNG7O60262 68 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 CST4P01036 141 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 ASCL3Q9NQ33 180 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 OGG1O15527 345 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 KCNAB3O43448 404 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 BRS3P32247 399 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 SLC26A10Q8NG04 563 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 NEIL1Q96FI4 390 aaPredicted RBP11.27□□□□□ -0.61
PTPRK-207ENST00000368226 MED30Q96HR3 178 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 CXorf58Q96LI9 332 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 TDRD15B5MCY1 1934 aaKnown RBP11.27□□□□□ -0.61
PTPRK-207ENST00000368226 GREM1O60565 184 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
PTPRK-207ENST00000368226 CHST1O43916 411 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 PSG4Q00888 419 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 ZNF826PQ6ZT77 177 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TCTE3Q8IZS6 198 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 FLYWCH2Q96CP2 140 aaKnown RBP11.26□□□□□ -0.61
PTPRK-207ENST00000368226 LINC00052Q96N35 136 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 THYN1Q9P016 225 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 B4E171 279 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TSPAN7P41732 249 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
PTPRK-207ENST00000368226 EIF4EBP2Q13542 120 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-207ENST00000368226 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 IL17BQ9UHF5 180 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 ADAMTS7Q9UKP4 1686 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TO15178 435 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 NAT2P11245 290 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 PSG2P11465 335 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 PRF1P14222 555 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 CAMPP49913 170 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TMPRSS3P57727 454 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 STARD6P59095 220 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 Q1RN00 199 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 GRAMD2BQ96HH9 432 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 WFDC6Q9BQY6 131 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 CACFD1Q9UGQ2 172 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 ANKRD34CP0C6C1 535 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 GALR1P47211 349 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 INO80CQ6PI98 192 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-207ENST00000368226 MRPL24Q96A35 216 aaKnown RBP11.26□□□□□ -0.61
PTPRK-207ENST00000368226 SLC2A8Q9NY64 477 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 PCM1Q15154 2024 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 KIAA1324LA8MWY0 1029 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-207ENST00000368226 CDRT15L2A8MXV6 281 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TIAF1O95411 115 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TCL1AP56279 114 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 TMEM33P57088 247 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 MMDQ15546 238 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 SLC7A10Q9NS82 523 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 PILRAQ9UKJ1 303 aa11.26□□□□□ -0.61
PTPRK-207ENST00000368226 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms