RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 C20orf141Q9NUB4 165 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 ACER3Q9NUN7 267 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 LSM2Q9Y333 95 aaKnown RBP6.29□□□□□ -1.4
SPTA1-201ENST00000368147 ATRXP46100 2492 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 FKBP2P26885 142 aaKnown RBP6.29□□□□□ -1.4
SPTA1-201ENST00000368147 GCAP28676 217 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 PNRC1Q12796 327 aaPredicted RBP6.29□□□□□ -1.4
SPTA1-201ENST00000368147 TGIF1Q15583 401 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 PLK5Q496M5 336 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 LIPNQ5VXI9 398 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 SIAH3Q8IW03 269 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 GPBAR1Q8TDU6 330 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 NTNG2Q96CW9 530 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 NXF2Q9GZY0 626 aaKnown RBP6.29□□□□□ -1.4
SPTA1-201ENST00000368147 OR4C46A6NHA9 309 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 MPZL1O95297 269 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 DUS4LO95620 317 aaKnown RBP6.29□□□□□ -1.4
SPTA1-201ENST00000368147 NAT2P11245 290 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 HRH1P35367 487 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 FAM3AP98173 230 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM268Q5VZI3 342 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 DHRS4L2Q6PKH6 230 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 TMED6Q8WW62 240 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 ST8SIA1Q92185 356 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 STARD4Q96DR4 205 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 PELI1Q96FA3 418 aa6.29□□□□□ -1.4
SPTA1-201ENST00000368147 ALPK2Q86TB3 2170 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 H3BP45 60 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CDK2AP2O75956 126 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CHRM2P08172 466 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CLEC2LP0C7M8 214 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SLC25A4P12235 298 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CD80P33681 288 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 NXPH1P58417 271 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 FAM53BQ14153 422 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM249Q2WGJ8 235 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF260Q3ZCT1 412 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 PABPC1L2AQ5JQF8 200 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 C1QL3Q5VWW1 255 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 Q6ZSR9 355 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 PHLDA1Q8WV24 401 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM147Q9BVK8 224 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 RNF167Q9H6Y7 350 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 MMP26Q9NRE1 261 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 AMMECR1Q9Y4X0 333 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 EPOPA6NHQ4 379 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 PF4V1P10720 104 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 REG1BP48304 166 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SLC35D3Q5M8T2 416 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SAPCD1Q5SSQ6 148 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CALHM1Q8IU99 346 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ARIH2OSQ8N7S6 290 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 OR1L4Q8NGR5 311 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ABHD3Q8WU67 409 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CDC42EP3Q9UKI2 254 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CSAG2Q9Y5P2 127 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 RBBP6Q7Z6E9 1792 aaKnown RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 NCOR1O75376 2440 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 A0A1W2PNV4 684 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 BMP2P12643 396 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CLDN18P56856 261 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 LCN15Q6UWW0 184 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SLC38A9Q8NBW4 561 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF426Q9BUY5 554 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 TMUB1Q9BVT8 246 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 HDGFL3Q9Y3E1 203 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 LILRA5A6NI73 299 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SLC25A20O43772 301 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CELA2AP08217 269 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CD40P25942 277 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 FAM74A3Q4VXF1 159 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CYS1Q717R9 158 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CALHM3Q86XJ0 350 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 OR5AU1Q8NGC0 362 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 IL21Q9HBE4 155 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 RABAC1Q9UI14 185 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 B4DEV8 164 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CLDN34H7C241 214 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 RER1O15258 196 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 HPP00738 406 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 MEOX2P50222 304 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 MGST2Q99735 147 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SEBOXQ9HB31 216 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 SLC7A10Q9NS82 523 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 COL11A2P13942 1736 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 LRP5O75197 1615 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 OR2A25A4D2G3 310 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CGB1A6NKQ9 187 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 OR4A8P0C604 315 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ZP3P21754 424 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF117Q03924 483 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 FCRL6Q6DN72 434 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ACSM5Q6NUN0 579 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 TMEM123Q8N131 208 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 ZNF707Q96C28 371 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 NDUFB11Q9NX14 153 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms