RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 OR51T1Q8NGJ9 327 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 OR10K1Q8NGX5 313 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 OR8S1Q8NH09 359 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 GPX8Q8TED1 209 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
USF1-203ENST00000368021 LURAP1Q96LR2 239 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 NICN1Q9BSH3 213 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 PKIBQ9C010 78 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 SELENOIQ9C0D9 397 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 TMPRSS5Q9H3S3 457 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
USF1-203ENST00000368021 C19orf12Q9NSK7 152 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 TMEM100Q9NV29 134 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 TAS2R8Q9NYW2 309 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 KLK11Q9UBX7 282 aa10.28□□□□□ -0.76
USF1-203ENST00000368021 TMEM210A6NLX4 147 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 FOXI3A8MTJ6 420 aaPredicted RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 C1orf196B1AJZ1 125 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 TIMM8AO60220 97 aaPredicted RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 RBBP9O75884 186 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 CYB5AP00167 134 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 GSTP1P09211 210 aaKnown RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 PTHLHP12272 177 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 FABP6P51161 128 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 SORDQ00796 357 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 DEFA5Q01523 94 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 TFF3Q07654 80 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 IL24Q13007 206 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 KLF9Q13886 244 aaPredicted RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 ARL6IP1Q15041 203 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 RNASE12Q5GAN4 147 aaKnown RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 ZNF787Q6DD87 383 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 Q6ZTK2 550 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 MKXQ8IYA7 352 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 DVL3Q92997 716 aaPredicted RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 RAB3CQ96E17 227 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 SEH1LQ96EE3 360 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 ADAT1Q9BUB4 502 aaKnown RBP10.27□□□□□ -0.77
USF1-203ENST00000368021 OR51I2Q9H344 312 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 RHOFQ9HBH0 211 aa10.27□□□□□ -0.77
USF1-203ENST00000368021 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 ANKRD20A5PA0PJZ0 165 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 SOCS1O15524 211 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 IGHV3-13P01766 116 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 FCER2P06734 321 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 SFTPBP07988 381 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 HIST1H1DP16402 221 aaKnown RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 SRP9P49458 86 aaKnown RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 TMEM50BP56557 158 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 ACTBP60709 375 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 RAB2AP61019 212 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 ACTG1P63261 375 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 WFDC8Q8IUA0 241 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 OSR2Q8N2R0 312 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 CHST4Q8NCG5 386 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 OR2T35Q8NGX2 323 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 WFIKKN1Q96NZ8 548 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 PFDN5Q99471 154 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 GPN1Q9HCN4 374 aaPredicted RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 ZNF107Q9UII5 783 aaPredicted RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 UNC79Q9P2D8 2635 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 FBN2P35556 2912 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 TMEM218A2RU14 115 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 DISC1C4P0D8 188 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 SMLR1H3BR10 107 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 J3QT63 122 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 SSNA1O43805 119 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 GLAP06280 429 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 RAB5CP51148 216 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 KLF3P57682 345 aaPredicted RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 OR8G1Q15617 311 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 PNLIPRP3Q17RR3 467 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 PLAC9Q5JTB6 97 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 ZNF561Q8N587 486 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 OR11H4Q8NGC9 324 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 OR13G1Q8NGZ3 307 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 TSNAXQ99598 290 aaKnown RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 GINS4Q9BRT9 223 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 UNKLQ9H9P5 680 aaKnown RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 ZMAT3Q9HA38 289 aaKnown RBP10.26□□□□□ -0.77
USF1-203ENST00000368021 NKIRAS2Q9NYR9 191 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 LRBAP50851 2863 aa10.26□□□□□ -0.77
USF1-203ENST00000368021 ITPR2Q14571 2701 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A10PA6NDY2 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A18PA6NE21 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A16PA6NEW6 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 DPRXA6NFQ7 191 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A20PA6NIJ5 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A8PA6NJQ4 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A7PA6NKC0 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 SERPINE3A8MV23 424 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A22PA8MWA6 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A12PA8MX19 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A5PA8MXJ8 464 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms