RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CHATP28329 748 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 NPBWR2P48146 333 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 FABP6P51161 128 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 CCR6P51684 374 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 MZT1Q08AG7 82 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 ARFRP1Q13795 201 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 MEF2DQ14814 521 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 TAF9Q16594 264 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 TATDN3Q17R31 274 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 MPV17LQ2QL34 196 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 ACTBL2Q562R1 376 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 SFRP4Q6FHJ7 346 aaPredicted RBP9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 HAGHLQ6PII5 290 aaPredicted RBP9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 TMEM108Q6UXF1 575 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF554Q86TJ5 538 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 RTN4RL2Q86UN3 420 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 Q8IYB0 196 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 NUP37Q8NFH4 326 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 OR13G1Q8NGZ3 307 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 SLAMF9Q96A28 289 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 NUDT15Q9NV35 164 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 PLEKHJ1Q9NW61 149 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 MCUBQ9NWR8 336 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 NKIRAS2Q9NYR9 191 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 MTCH1Q9NZJ7 389 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 POLDIP2Q9Y2S7 368 aa9.44□□□□□ -0.9
CSNK1E-202ENST00000366216 IGLV3-9A0A075B6K5 115 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 A0A0B4J293 547 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 HMX3A6NHT5 357 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 DISC1C4P0D8 188 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 GEMIN2O14893 280 aaKnown RBP9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 MLNRO43193 412 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 PDCD6O75340 191 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 FUT3P21217 361 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 MECP2P51608 486 aaKnown RBP9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 IL13RA2Q14627 380 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 ZMYND11Q15326 602 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 RBMS2Q15434 407 aaKnown RBP9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 PIGYQ3MUY2 71 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 SLC22A25Q6T423 547 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF782Q6ZMW2 699 aaPredicted RBP9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 WDR86Q86TI4 376 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 GVQW1Q8N7I0 195 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 OR10AD1Q8NGE0 317 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 EMG1Q92979 244 aaKnown RBP9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 TLNRD1Q9H1K6 362 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 C20orf85Q9H1P6 137 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 SLC2A8Q9NY64 477 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 ARHGAP32A7KAX9 2087 aa9.43□□□□□ -0.9
CSNK1E-202ENST00000366216 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 C7orf66A4D0T2 115 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 PRAF2O60831 178 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 NOS1APO75052 506 aaPredicted RBP9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 GLAP06280 429 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF735P0CB33 412 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 DTYMKP23919 212 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 KLF3P57682 345 aaPredicted RBP9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF154Q13106 437 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 CARTPTQ16568 116 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 AWAT1Q58HT5 328 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 RNASE10Q5GAN6 216 aaKnown RBP9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 NKAPLQ5M9Q1 402 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 VAX1Q5SQQ9 334 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 FAAP20Q6NZ36 180 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 TREML4Q6UXN2 200 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 Q6ZR03 302 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 C6orf201Q7Z4U5 140 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 SCCPDHQ8NBX0 429 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 OR4D10Q8NGI6 311 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 OR51S1Q8NGJ8 323 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 SLC25A21Q9BQT8 299 aaPredicted RBP9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 TINAGL1Q9GZM7 467 aaPredicted RBP9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 CHST6Q9GZX3 395 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 RCC2Q9P258 522 aaKnown RBP9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 SCP2D1Q9UJQ7 156 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 ALG5Q9Y673 324 aa9.42□□□□□ -0.9
CSNK1E-202ENST00000366216 ATP6V1G2-DDX39BF2Z307 99 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 F8VVB4 439 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 F8VWA3 439 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 H0YL77 283 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 TRIM77I1YAP6 450 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 PEX14O75381 377 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 OR7C1O76099 320 aaPredicted RBP9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 AMY2AP04746 511 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 PGA5P0DJD9 388 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 IL2RGP31785 369 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 CD200P41217 278 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 TAS2R46P59540 309 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 SELENOVP59797 346 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 ERVK11-1P61568 191 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 PEG10Q86TG7 708 aaKnown RBP9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 FAM58AQ8N1B3 248 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 BPIFB2Q8N4F0 458 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 OR4S1Q8NGB4 309 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 OR4K15Q8NH41 348 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms