RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 LIPT2A6NK58 231 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 CNN1P51911 297 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 FOXK1P85037 733 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF816Q0VGE8 651 aaPredicted RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 TMPRSS7Q7RTY8 843 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 TIPARPQ7Z3E1 657 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 OR6X1Q8NH79 312 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 CTHRC1Q96CG8 243 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 A0A1W2PR80 420 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 C5orf49A4QMS7 147 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 TMEM14DPA8MWL7 114 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 PRR32B1ATL7 298 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 FOLR2P14207 255 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 HIST1H1BP16401 226 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 CDC34P49427 236 aaPredicted RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 SUCLG1P53597 346 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 EDDM3BP56851 147 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 RPS19BP1Q86WX3 136 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 OR5AS1Q8N127 324 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 SLC24A4Q8NFF2 622 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 DOCK6Q96HP0 2047 aa14.01□□□□□ -0.17
CLSTN1-201ENST00000361311 SPINT1O43278 529 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 GRPP07492 148 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 GCH1P30793 250 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 GPM6AP51674 278 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 CASP6P55212 293 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 CEACAM16Q2WEN9 425 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 WDR25Q64LD2 544 aaPredicted RBP14□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF774Q6NX45 483 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 KDF1Q8NAX2 398 aaPredicted RBP14□□□□□ -0.17
CLSTN1-201ENST00000361311 ELSPBP1Q96BH3 223 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 LRRC3BQ96PB8 259 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 RAB9BQ9NP90 201 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 BET1LQ9NYM9 111 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 TMEM50BP56557 158 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 UNC119Q13432 240 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 GPBAR1Q8TDU6 330 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 PTPMT1Q8WUK0 201 aaPredicted RBP14□□□□□ -0.17
CLSTN1-201ENST00000361311 G6PC2Q9NQR9 355 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 CCL28Q9NRJ3 127 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 CXCL13O43927 109 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 CELA2BP08218 269 aaPredicted RBP14□□□□□ -0.17
CLSTN1-201ENST00000361311 HOXC4P09017 264 aaPredicted RBP14□□□□□ -0.17
CLSTN1-201ENST00000361311 SMIM15Q7Z3B0 74 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 OR5AU1Q8NGC0 362 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 OR5B3Q8NH48 314 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 CHST5Q9GZS9 411 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 SPINT2O43291 252 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 TOX4O94842 621 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 VN1R17PQ8TDU5 208 aa14□□□□□ -0.17
CLSTN1-201ENST00000361311 TPRP12270 2363 aaKnown RBP14□□□□□ -0.17
CLSTN1-201ENST00000361311 UNC13CQ8NB66 2214 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PATJQ8NI35 1801 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 A0A096LPE4 126 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 A0A1W2PPZ6 126 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 LILRA5A6NI73 299 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 C11orf94C9JXX5 98 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 TRAF3IP2O43734 574 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 OR7C2O60412 319 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 SMIM10L1P0DMW3 83 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 ARL3P36405 182 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 HIKESHIQ53FT3 197 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 SMIM10Q96HG1 83 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PCGF1Q9BSM1 259 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 MANBALQ9NQG1 85 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 SLC7A10Q9NS82 523 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 BOKQ9UMX3 212 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 FOXS1O43638 330 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF735P0CB33 412 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PNLIPP16233 465 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 DUSP3P51452 185 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 ARTNQ5T4W7 220 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 OR52M1Q8NGK5 317 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF596Q8TC21 504 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 LRRC61Q9BV99 259 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PCOLCE2Q9UKZ9 415 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 MYLKQ15746 1914 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PAPPA2Q9BXP8 1791 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 CXCL12P48061 93 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 COL5A1-AS1Q5SY13 56 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 OR10G3Q8NGC4 313 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 RSG1Q9BU20 258 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 AURKAIP1Q9NWT8 199 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 RRP8O43159 456 aaKnown RBP13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 FCGR3AP08637 254 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 EDDM3AQ14507 147 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PIGYQ3MUY2 71 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 SPACA9Q96E40 222 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 FOXB1Q99853 325 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 GPR27Q9NS67 375 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 NAGKQ9UJ70 344 aa13.99□□□□□ -0.17
CLSTN1-201ENST00000361311 PAGE4O60829 102 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 HRASP01112 189 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF32P17041 273 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 DEFB123Q8N688 67 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 NUDT16L1Q9BRJ7 211 aaKnown RBP13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 ZNF391Q9UJN7 358 aa13.98□□□□□ -0.17
CLSTN1-201ENST00000361311 AQP7P3A6NL99 342 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms