RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ANKRD55Q3KP44 614 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 FAM74A3Q4VXF1 159 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 AADACL3Q5VUY0 350 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 LINC00518Q8N0U6 118 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 FAM169BQ8N8A8 192 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 NPRL2Q8WTW4 380 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 SPSB1Q96BD6 273 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 RRNAD1Q96FB5 475 aaKnown RBP11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 C1orf123Q9NWV4 160 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 SLC7A11Q9UPY5 501 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 ZFYVE26Q68DK2 2539 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 FOXI3A8MTJ6 420 aaPredicted RBP11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 HTR3BO95264 441 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 GLRA1P23415 457 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 RBMXP38159 391 aaKnown RBP11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 CA7P43166 264 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 POC1AQ8NBT0 407 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 PIGCQ92535 297 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 CNTNAP3Q9BZ76 1288 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 GPR173Q9NS66 373 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
SQSTM1-201ENST00000360718 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 SDCBPO00560 298 aaPredicted RBP11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 SIGLEC5O15389 551 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 SNAPINO95295 136 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 IFNA2P01563 188 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 PI3P19957 117 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 SERPINA2P20848 420 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 PPP1CBP62140 327 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 FAM27E3Q08E93 113 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 C10orf91Q5T1B1 145 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 HAGHLQ6PII5 290 aaPredicted RBP11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 CRIP3Q6Q6R5 217 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 OR56B2PQ8NGI1 322 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 ELL3Q9HB65 397 aaPredicted RBP11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 TREM1Q9NP99 234 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 OR5AC2Q9NZP5 309 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 GSKIPQ9P0R6 139 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 EDARQ9UNE0 448 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 KLF2Q9Y5W3 355 aaPredicted RBP11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 IGLV1-44P01699 117 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 H2AFB1P0C5Y9 115 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 FAM157CP0CG43 387 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 CCKARP32238 428 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 UCP2P55851 309 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 RAB32Q13637 225 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 SMCO1Q147U7 214 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 PLCXD3Q63HM9 321 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 TMEM42Q69YG0 159 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 OR5D18Q8NGL1 313 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 PIGTQ969N2 578 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 OR10C1Q96KK4 312 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 LPAR3Q9UBY5 353 aa11.25□□□□□ -0.61
SQSTM1-201ENST00000360718 CADP27708 2225 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 CCL21O00585 134 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 SMPD2O60906 423 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 IFNA21P01568 189 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 CECR9P0C854 216 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 MTCP1P56278 107 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 IL15RAQ13261 267 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 C1QL2Q7Z5L3 287 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 PUSL1Q8N0Z8 303 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 PAPOLGQ9BWT3 736 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 SLC5A7Q9GZV3 580 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 OR2S2Q9NQN1 319 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 PLEKHJ1Q9NW61 149 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 DIDO1Q9BTC0 2240 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 FAM230AA0A1W2PPH8 454 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 ANKRD30BLA7E2S9 258 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 CD300LBA8K4G0 201 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 C16orf97H3BN30 126 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 GPR31O00270 319 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 KNG1P01042 644 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 SFTPBP07988 381 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 HOXB5P09067 269 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 RPS2P15880 293 aaKnown RBP11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 TUBG1P23258 451 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 RBP2P50120 134 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 S100A10P60903 97 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 ALKBH2Q6NS38 261 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 LHFPL2Q6ZUX7 228 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 C1orf174Q8IYL3 243 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 OR1J1Q8NGS3 322 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 ZNF701Q9NV72 531 aaPredicted RBP11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 CRIM1Q9NZV1 1036 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 JKAMPQ9P055 326 aa11.24□□□□□ -0.61
SQSTM1-201ENST00000360718 HIVEP3Q5T1R4 2406 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms