RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 USP9XQ93008 2570 aaPredicted RBP19.45■□□□□ 0.7
SDF4-202ENST00000360001 IGKV1D-17A0A075B6S4 117 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 IGHV3OR15-7A0A075B7D8 119 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 OR2AT4A6NND4 320 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 RNF224P0DH78 156 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 CD80P33681 288 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 MECP2P51608 486 aaKnown RBP19.44■□□□□ 0.7
SDF4-202ENST00000360001 NEURL2Q9BR09 285 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 BEX2Q9BXY8 128 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 SEBOXQ9HB31 216 aaPredicted RBP19.44■□□□□ 0.7
SDF4-202ENST00000360001 BEX1Q9HBH7 125 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 DCAF16Q9NXF7 216 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 C7orf66A4D0T2 115 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 PRDX2P32119 198 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 COL10A1Q03692 680 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 ZNF880Q6PDB4 577 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 ZNF497Q6ZNH5 498 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 GAPTQ8N292 157 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 CHAC2Q8WUX2 184 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 GIMAP1Q8WWP7 306 aa19.44■□□□□ 0.7
SDF4-202ENST00000360001 A0A0A6YYJ9 748 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 ANXA7P20073 488 aaKnown RBP19.43■□□□□ 0.7
SDF4-202ENST00000360001 TSPAN5P62079 268 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 SNRPD2P62316 118 aaKnown RBP19.43■□□□□ 0.7
SDF4-202ENST00000360001 ATXN7L3Q14CW9 347 aaPredicted RBP19.43■□□□□ 0.7
SDF4-202ENST00000360001 TMEM82A0PJX8 343 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 GSTT2P0CG29 244 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 C17orf107Q6ZR85 190 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 TERB2Q8NHR7 220 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 GHITMQ9H3K2 345 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 ZNF222Q9UK12 451 aa19.43■□□□□ 0.7
SDF4-202ENST00000360001 LRBAP50851 2863 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 A0A1W2PPR1 153 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 IRF2P14316 349 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 OR3A1P47881 315 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 GRK1Q15835 563 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 LHFPL1Q86WI0 220 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 HPS1Q92902 700 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 NECAP2Q9NVZ3 263 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 ING3Q9NXR8 418 aa19.42■□□□□ 0.7
SDF4-202ENST00000360001 RLN1P04808 185 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 ATPAF1Q5TC12 328 aaPredicted RBP19.41■□□□□ 0.7
SDF4-202ENST00000360001 TMEM17Q86X19 198 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 ANGPTL6Q8NI99 470 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 VSIG4Q9Y279 399 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 ZNF737O75373 536 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 ZNF205O95201 554 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 OR5H8P0DN80 308 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 ZNF660Q6AZW8 331 aaPredicted RBP19.41■□□□□ 0.7
SDF4-202ENST00000360001 SLC36A1Q7Z2H8 476 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 C5orf24Q7Z6I8 188 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 SHARPINQ9H0F6 387 aa19.41■□□□□ 0.7
SDF4-202ENST00000360001 UBR5O95071 2799 aaPredicted RBP19.4■□□□□ 0.7
SDF4-202ENST00000360001 LRRC30A6NM36 301 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 POM121CA8CG34 1229 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 H7C1Q1 480 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 PRAF2O60831 178 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 VSIG10L2P0DP72 767 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 RCC1P18754 421 aaPredicted RBP19.4■□□□□ 0.7
SDF4-202ENST00000360001 AADACL3Q5VUY0 350 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 LIME1Q9H400 295 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 DSCAMO60469 2012 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 TANC2Q9HCD6 1990 aa19.4■□□□□ 0.7
SDF4-202ENST00000360001 TRDCB7Z8K6 153 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 HPXP02790 462 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 SCTP09683 121 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 GABRA2P47869 451 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 KCNJ3P48549 501 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 PPOXP50336 477 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 IGSF11Q5DX21 431 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 TEX36Q5VZQ5 186 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 STUMQ69YW2 141 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 ZDHHC22Q8N966 263 aa19.39■□□□□ 0.7
SDF4-202ENST00000360001 ASCC1Q8N9N2 400 aaKnown RBP19.39■□□□□ 0.7
SDF4-202ENST00000360001 KIR2DS1A0A191URI9 304 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 CEACAM18A8MTB9 384 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 FABP7O15540 132 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 CD8AP01732 235 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 IL5P05113 134 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 KIR2DS4P43632 304 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 NPY4RP50391 375 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 KIR2DS1Q14954 304 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 C11orf71Q6IPW1 123 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 GLDNQ6ZMI3 551 aaPredicted RBP19.39■□□□□ 0.69
SDF4-202ENST00000360001 MEX3BQ6ZN04 569 aaKnown RBP19.39■□□□□ 0.69
SDF4-202ENST00000360001 OR6F1Q8NGZ6 308 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 MARCH1Q8TCQ1 289 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 CCDC107Q8WV48 283 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 COQ2Q96H96 371 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 CBLN4Q9NTU7 201 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 ZNF221Q9UK13 617 aa19.39■□□□□ 0.69
SDF4-202ENST00000360001 OOEPA6NGQ2 149 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 HMX3A6NHT5 357 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 TMEM178BH3BS89 294 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 AESQ08117 197 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 CD300CQ08708 224 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 SLC35E4Q6ICL7 350 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 DHRS11Q6UWP2 260 aa19.38■□□□□ 0.69
SDF4-202ENST00000360001 VRK1Q99986 396 aaPredicted RBP19.38■□□□□ 0.69
SDF4-202ENST00000360001 SEC22CQ9BRL7 303 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms