RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 WDR34Q96EX3 536 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF799Q96GE5 643 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 HYAL3O43820 417 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 GCM2O75603 506 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 CRYAAP02489 173 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SUB1P53999 127 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM52BQ4KMG9 183 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 PSMG4Q5JS54 123 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 Q6ZSR6 202 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 LINC01465Q8N7H1 131 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 STARD10Q9Y365 291 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 A0A087WUJ7 227 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 UQCRFS1P47985 274 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 P2RY6Q15077 328 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 ANXA10Q9UJ72 324 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TRBV5-7A0A0A0MS05 114 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SH2D1BO14796 132 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SNCGO76070 127 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 AMY1AP04745 511 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 ANKRD55Q3KP44 614 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 HPRT1P00492 218 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 ST6GAL1P15907 406 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 LIMS1P48059 325 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 BATF2Q8N1L9 274 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SRD5A3Q9H8P0 318 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 KIR2DS5A0A0G2JLQ3 304 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 A0A0G2JNG1 304 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 KIR2DS3K7RE56 304 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 BCAT2O15382 392 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 IGLV3-27P01718 113 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 OR5AL1P0C617 328 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM50BP56557 158 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 C1orf61Q13536 156 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 KIR2DS5Q14953 304 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 WFDC5Q8TCV5 224 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 MCTS1Q9ULC4 181 aaKnown RBP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SSUH2Q9Y2M2 353 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 FSTP19883 344 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TRAT1Q6PIZ9 186 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SPANXA1Q9NS26 97 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 MED29Q9NX70 200 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SERTM2A0A1B0GWG4 89 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 SLC22A20A6NK97 555 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 PAGE4O60829 102 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 HNRNPA1P09651 372 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13B-203ENST00000358544 OR8G5Q8NG78 346 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 PTX4Q96A99 478 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 COLCA2A8K830 154 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 HKR1P10072 659 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 FUT7Q11130 342 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 C2orf68Q2NKX9 166 aa5.38□□□□□ -1.55
VPS13B-203ENST00000358544 TOPAZ1Q8N9V7 1692 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 CLDN15P56746 228 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RND3P61587 244 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RUNX1Q01196 453 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 LYZL2Q7Z4W2 148 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 AQP3Q92482 292 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ST3GAL6Q9Y274 331 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF708P17019 499 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 NPBWR2P48146 333 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 FUT6P51993 359 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 IP6K3Q96PC2 410 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PARLQ9H300 379 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 FRRS1LQ9P0K9 344 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PIAS3Q9Y6X2 628 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 BMI1P35226 326 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RTL10Q7L3V2 364 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 SLC36A1Q7Z2H8 476 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PGLYRP3Q96LB9 341 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BKO60814 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BJP06899 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BOP23527 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 EPHA8P29322 1005 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BBP33778 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RABIFP47224 123 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BDP58876 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BCP62807 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST2H2BEQ16778 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 SNAI3Q3KNW1 292 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF793Q6ZN11 406 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 SLC25A26Q70HW3 274 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 OR10AC1Q8NH08 325 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BHQ93079 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ADTRPQ96IZ2 230 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 DEFB118Q96PH6 123 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BNQ99877 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H2BMQ99879 126 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 APOOQ9BUR5 198 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 A0A1W2PR80 420 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 SP1P08047 785 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PMCHL1Q16048 86 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 TIMM10BQ9Y5J6 103 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 A0A1B0GU03 582 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 TCTAP57738 103 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 GGTLC2Q14390 218 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 SHHQ15465 462 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms