RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OR1L3Q8NH93 324 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 MRPS18AQ9NVS2 196 aaKnown RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 GREB1LQ9C091 1923 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 MEF2BQ02080 365 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM183AQ8IXX5 376 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 OR1F12Q8NHA8 337 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 SLC37A2Q8TED4 501 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 WDR34Q96EX3 536 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 AKIRIN1Q9H9L7 192 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF729A6NN14 1252 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 PDCD6O75340 191 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 PEX11BO96011 259 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 IGHEP01854 428 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 B4GALT1P15291 398 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 C11orf40Q8WZ69 217 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 GMPPAQ96IJ6 420 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 IL23AQ9NPF7 189 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 DOK5Q9P104 306 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 FBLL1A6NHQ2 334 aaKnown RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 ALOX12BO75342 701 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 CDKN2AP42771 156 aaKnown RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 OR11H4Q8NGC9 324 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 APOBEC3DQ96AK3 386 aaPredicted RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 OCIAD1Q9NX40 245 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 DHCR7Q9UBM7 475 aaKnown RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 HELTA6NFD8 242 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 SERF2P84101 59 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 TSPAN32Q96QS1 320 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 SAP30LQ9HAJ7 183 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM131Q92545 1883 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 CTXND1A0A1B0GTU2 59 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 NPIPB9F8W1W9 429 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 SLC25A5P05141 298 aaKnown RBP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 PSMB2P49721 201 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 B4GALNT1Q00973 533 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 EWSR1Q01844 656 aaKnown RBP eCLIP7.78□□□□□ -1.16
COL6A6-201ENST00000358511 OTPQ5XKR4 325 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 KCNE4Q8WWG9 221 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 CLEC5AQ9NY25 188 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 CEACAM6P40199 344 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 FAM78AQ5JUQ0 283 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 OR2T6Q8NHC8 308 aa7.78□□□□□ -1.16
COL6A6-201ENST00000358511 CACNA1HO95180 2353 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 CORTO00230 105 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 CYB561P49447 251 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 CDKN3Q16667 212 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 HFEQ30201 348 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 PLPPR5Q32ZL2 321 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 DMRTA1Q5VZB9 504 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.77□□□□□ -1.16
COL6A6-201ENST00000358511 RSG1Q9BU20 258 aa7.77□□□□□ -1.16
COL6A6-201ENST00000358511 G3V3Y1 287 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 LYZL6O75951 148 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 GLULP15104 373 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 SIGLEC14Q08ET2 396 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 TIMD4Q96H15 378 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 COL25A1Q9BXS0 654 aaPredicted RBP7.77□□□□□ -1.17
COL6A6-201ENST00000358511 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 A0A1B0GU03 582 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 KCNAB3O43448 404 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 SCGB1D4Q6XE38 83 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 D2HGDHQ8N465 521 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 MRPL30Q8TCC3 161 aaKnown RBP7.77□□□□□ -1.17
COL6A6-201ENST00000358511 C10orf35Q96D05 121 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 AQP10Q96PS8 301 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 FGF21Q9NSA1 209 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 OBP2AQ9NY56 170 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 FOXJ2Q9P0K8 574 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 A6NJY4 79 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 H3BVH4 76 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 MRPS21P82921 87 aaKnown RBP7.77□□□□□ -1.17
COL6A6-201ENST00000358511 SPNS2Q8IVW8 549 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 WIPI2Q9Y4P8 454 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 RECKO95980 971 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 CA2P00918 260 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 CDAP32320 146 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 GNG10P50151 68 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 H2BFSP57053 126 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 MVB12AQ96EY5 273 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 EGLN1Q9GZT9 426 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 CES1P1Q9UKY3 287 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 NCOR1O75376 2440 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 A0A0G2JMZ2 1700 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 LRRC37A2A6NM11 1700 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 LRRC37AA6NMS7 1700 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 IGSF23A1L1A6 192 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 SYNGR2O43760 224 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 CHST1O43916 411 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 HTN1P15515 57 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 ST6GAL1P15907 406 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 ADPRHP54922 357 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF793Q6ZN11 406 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 UBE2ZQ9H832 354 aaPredicted RBP7.77□□□□□ -1.17
COL6A6-201ENST00000358511 PIPOXQ9P0Z9 390 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 BRCA1P38398 1863 aaKnown RBP7.77□□□□□ -1.17
COL6A6-201ENST00000358511 FRMPD3Q5JV73 1810 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 RAB29O14966 203 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms