RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 VN1R1Q9GZP7 353 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 ZNF696Q9H7X3 374 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 PLEKHA2Q9HB19 425 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 RELQ04864 619 aaPredicted RBP8.65□□□□□ -1.02
CHD3-202ENST00000358181 PLK5Q496M5 336 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 OR2C3Q8N628 320 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 OR10D3Q8NH80 312 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 RHOXF1Q8NHV9 184 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 MCHR2Q969V1 340 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 SEC11CQ9BY50 192 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 SLC25A10Q9UBX3 287 aaPredicted RBP8.65□□□□□ -1.02
CHD3-202ENST00000358181 FGF17O60258 216 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 FKBP2P26885 142 aaKnown RBP8.65□□□□□ -1.02
CHD3-202ENST00000358181 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 DUSP8Q13202 625 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 CBLL1Q75N03 491 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 MRGPRX1Q96LB2 322 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 C12orf57Q99622 126 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 ALX3O95076 343 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 PFN3P60673 137 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 SLC25A53Q5H9E4 307 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 OR10G4Q8NGN3 311 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 OR10G9Q8NGN4 311 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 OR10G7Q8NGN6 311 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 CACNG5Q9UF02 275 aa8.65□□□□□ -1.02
CHD3-202ENST00000358181 N4BP2Q86UW6 1770 aaPredicted RBP8.65□□□□□ -1.03
CHD3-202ENST00000358181 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.03
CHD3-202ENST00000358181 TDGF1P3P51864 188 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 PABPC1L2AQ5JQF8 200 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 SLC35B4Q969S0 331 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 HIST1H4GQ99525 98 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 PRRX2Q99811 253 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 IL36RNQ9UBH0 155 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 ANKRD33Q7Z3H0 272 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 TCTEX1D1Q8N7M0 179 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 R3HDM4Q96D70 268 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 MRGPRX4Q96LA9 322 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 HARBI1Q96MB7 349 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 NIPSNAP1Q9BPW8 284 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 HIGD1AQ9Y241 93 aa8.65□□□□□ -1.03
CHD3-202ENST00000358181 hCG_38984A0A1B0GV85 526 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 TMEM189A5PLL7 270 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 GPX1P07203 203 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 INHBBP09529 407 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 SPI1P17947 270 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 CD96P40200 585 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 FUT7Q11130 342 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 PTOV1Q86YD1 416 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 C16orf52Q8NHV5 167 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 SLC25A40Q8TBP6 338 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 ZG16BQ96DA0 208 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 AURKAIP1Q9NWT8 199 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 HS3ST2Q9Y278 367 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 FTH1P19P0C7X4 201 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 CGB7P0DN87 165 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 SUMO3P55854 103 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 OR1P1Q8NH06 330 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 ADAMTS17Q8TE56 1095 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 ZNF629Q9UEG4 869 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 PAGE4O60829 102 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 LIMS3P0CW19 117 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 LIMS4P0CW20 117 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 ATP5G2Q06055 141 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 SH2D5Q6ZV89 423 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 TMEM183AQ8IXX5 376 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 RNASEH2CQ8TDP1 164 aaKnown RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 RPP25Q9BUL9 199 aaKnown RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 TAAR5O14804 337 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 DHHO43323 396 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 CHST1O43916 411 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 IL9P15248 144 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 SSPNQ14714 243 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 PMS2CLQ68D20 193 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 PELI3Q8N2H9 469 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 SPICQ8N5J4 248 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 GPR82Q96P67 336 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 NINQ8N4C6 2090 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 TTC3P53804 2025 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 A0A1W2PR48 441 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 HMGA1P17096 107 aaKnown RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 CD22P20273 847 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 PYCR3Q53H96 274 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 C16orf47Q6ZP98 133 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 ZNF418Q8TF45 676 aaPredicted RBP8.64□□□□□ -1.03
CHD3-202ENST00000358181 MAP6Q96JE9 813 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 ZNF665Q9H7R5 613 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 LYRM4Q9HD34 91 aa8.64□□□□□ -1.03
CHD3-202ENST00000358181 IGHV3-35A0A0C4DH35 117 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 RBFOX2O43251 390 aaKnown RBP eCLIP8.63□□□□□ -1.033e-6■■■■□ 21.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms