RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 VN1R17PQ8TDU5 208 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 DYRK2Q92630 601 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 RNF166Q96A37 237 aaPredicted RBP8.73□□□□□ -1.01
RNF40-202ENST00000357890 GNPNAT1Q96EK6 184 aaPredicted RBP8.73□□□□□ -1.01
RNF40-202ENST00000357890 SPOCK3Q9BQ16 436 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 FAAP24Q9BTP7 215 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 CHRNA10Q9GZZ6 450 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 ZNF665Q9H7R5 613 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 MYOZ1Q9NP98 299 aaPredicted RBP8.73□□□□□ -1.01
RNF40-202ENST00000357890 RYDENQ9NUL5 291 aaKnown RBP8.73□□□□□ -1.01
RNF40-202ENST00000357890 TMED3Q9Y3Q3 217 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OR6C6A6NF89 314 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 C9J4A7 227 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 DVL1O14640 695 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 HSD17B6O14756 317 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OR2J2O76002 312 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OPN1MWP04001 364 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OPN1MW2P0DN77 364 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OPN1MW3P0DN78 364 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 SRFP11831 508 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 DYNLT3P51808 116 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 SUMO3P55854 103 aaPredicted RBP8.73□□□□□ -1.01
RNF40-202ENST00000357890 CD81P60033 236 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OR8B12Q8NGG6 310 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 IL1F10Q8WWZ1 152 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 SHDQ96IW2 340 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OR6C1Q96RD1 312 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 NECAP2Q9NVZ3 263 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 MS4A18H0YCH9 400 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 TP53I11O14683 189 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 BCAT2O15382 392 aaPredicted RBP8.73□□□□□ -1.01
RNF40-202ENST00000357890 GLIPR1P48060 266 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 COL10A1Q03692 680 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 MFAP5Q13361 173 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 MS4A18Q3C1V0 323 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 AADACL3Q5VUY0 350 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 KMT5CQ86Y97 462 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 D2HGDHQ8N465 521 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 OR52M1Q8NGK5 317 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 TMEM230Q96A57 120 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 BORCS8Q96FH0 119 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 FOXJ2Q9P0K8 574 aa8.73□□□□□ -1.01
RNF40-202ENST00000357890 NPSP0C0P6 89 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 OR4A8P0C604 315 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 MSX1P28360 303 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 NXPH1P58417 271 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 OR11L1Q8NGX0 322 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 PTX4Q96A99 478 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 LPAR5Q9H1C0 372 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 STARD10Q9Y365 291 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 TRAPPC1Q9Y5R8 145 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 PHF3Q92576 2039 aaKnown RBP8.72□□□□□ -1.01
RNF40-202ENST00000357890 IGHV3-15A0A0B4J1V0 119 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 SCRG1O75711 98 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 ISG15P05161 165 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 CD33P20138 364 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 NTF3P20783 257 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 WNT5AP41221 380 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 CADM4Q8NFZ8 388 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 OR10G3Q8NGC4 313 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 GNRHR2Q96P88 292 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 ULBP2Q9BZM5 246 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 ZDHHC11Q9H8X9 412 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 ZNF286AQ9HBT8 521 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 SPRY1O43609 319 aaPredicted RBP8.72□□□□□ -1.01
RNF40-202ENST00000357890 P2RY6Q15077 328 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 ASPHD2Q6ICH7 369 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 C16orf82Q7Z2V1 217 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 TMEM183AQ8IXX5 376 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 SPTSSAQ969W0 71 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 KIAA1456Q9P272 454 aa8.72□□□□□ -1.01
RNF40-202ENST00000357890 SPINK4O60575 86 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 AMBPP02760 352 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 HLA-GP17693 338 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 IGFBP3P17936 291 aaPredicted RBP8.71□□□□□ -1.01
RNF40-202ENST00000357890 CD82P27701 267 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 LTBRP36941 435 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 HIST1H3AP68431 136 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 ENDOGQ14249 297 aaKnown RBP8.71□□□□□ -1.01
RNF40-202ENST00000357890 FAM166AQ6J272 317 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 DEFB123Q8N688 67 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 MRGPRX4Q96LA9 322 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 TMEM208Q9BTX3 173 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 MOB1AQ9H8S9 216 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 DNAJC4Q9NNZ3 241 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 PLA2G3Q9NZ20 509 aa8.71□□□□□ -1.01
RNF40-202ENST00000357890 CHD3Q12873 2000 aaKnown RBP8.71□□□□□ -1.01
RNF40-202ENST00000357890 TICRRQ7Z2Z1 1910 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 CD300LBA8K4G0 201 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 ADAM20O43506 726 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 NPIPB7O75200 414 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 PSMB3P49720 205 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 FAM3BP58499 235 aaPredicted RBP8.71□□□□□ -1.02
RNF40-202ENST00000357890 UBE2G2P60604 165 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 DMWDQ09019 674 aa8.71□□□□□ -1.02
RNF40-202ENST00000357890 JOSD1Q15040 202 aaPredicted RBP8.71□□□□□ -1.02
RNF40-202ENST00000357890 BSXQ3C1V8 233 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms