RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KCNE3Q9Y6H6 103 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 ETHE1O95571 254 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 HSPB1P04792 205 aaKnown RBP11.37□□□□□ -0.59
SMC4-202ENST00000357388 NMUP48645 174 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 SSPNQ14714 243 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 OR1B1Q8NGR6 318 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 DDA1Q9BW61 102 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 A0A0B4J293 547 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 CEACAM5P06731 702 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 CXCL3P19876 107 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 HINT1P49773 126 aaPredicted RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 DEFB124Q8NES8 71 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 CDX2Q99626 313 aaPredicted RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 OR3A4PP47883 348 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 CD3EP07766 207 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 ORM2P19652 201 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 TWIST1Q15672 202 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 RBPMS2Q6ZRY4 209 aaKnown RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 SNRNP40Q96DI7 357 aaKnown RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 PPIL1Q9Y3C6 166 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 ASPDHA6ND91 283 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 PRSS23O95084 383 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 EMP1P54849 157 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 C10orf113Q5VZT2 155 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 CCL4L1Q8NHW4 92 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 BAZ2AQ9UIF9 1905 aaKnown RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 PQLC2LA1A4F0 135 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 ZNF83P51522 516 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 C21orf58P58505 322 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 JOSD1Q15040 202 aaPredicted RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 P2RX4Q99571 388 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 MS4A7Q9GZW8 240 aaPredicted RBP11.36□□□□□ -0.59
SMC4-202ENST00000357388 CHRNA10Q9GZZ6 450 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 IL19Q9UHD0 177 aa11.36□□□□□ -0.59
SMC4-202ENST00000357388 ALG1L2C9J202 215 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 ACTL6AO96019 429 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 CD74P04233 296 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 OR4A8P0C604 315 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 CDAP32320 146 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 LINC00596Q86U02 117 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 GABRG3Q99928 467 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 LRRC61Q9BV99 259 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 MED19A0JLT2 244 aaPredicted RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 CDK2AP1O14519 115 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 CDX1P47902 265 aaPredicted RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 MMP16P51512 607 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 IZUMO4Q1ZYL8 232 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 ALKBH3Q96Q83 286 aaPredicted RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 GLRX2Q9NS18 164 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 OOEPA6NGQ2 149 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 RELBQ01201 579 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 ALKBH6Q3KRA9 238 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 TUSC5Q8IXB3 177 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 OR2I1PQ8NGU4 316 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 FBLL1A6NHQ2 334 aaKnown RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 A8MWL6 223 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 TRIP6Q15654 476 aaKnown RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 WIPI1Q5MNZ9 446 aaPredicted RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 RBM14Q96PK6 669 aaKnown RBP11.35□□□□□ -0.59
SMC4-202ENST00000357388 TSPAN32Q96QS1 320 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 MIXL1Q9H2W2 232 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 DOK5Q9P104 306 aa11.35□□□□□ -0.59
SMC4-202ENST00000357388 TNFSF14O43557 240 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 KLF3P57682 345 aaPredicted RBP11.34□□□□□ -0.59
SMC4-202ENST00000357388 DNLZQ5SXM8 178 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 TRBV9A0A0B4J1U6 114 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 IGLV3-27P01718 113 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 TNFAIP6P98066 277 aaPredicted RBP11.34□□□□□ -0.59
SMC4-202ENST00000357388 CD300CQ08708 224 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 OR4C3Q8NH37 302 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 PTX4Q96A99 478 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 GPR27Q9NS67 375 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
SMC4-202ENST00000357388 C1RLQ9NZP8 487 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 CA11O75493 328 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 GABRG2P18507 467 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 PEF1Q9UBV8 284 aaKnown RBP11.34□□□□□ -0.59
SMC4-202ENST00000357388 LOC107984156A0A0G2JMH3 177 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 MPTX1A8MV57 137 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 ARL17AQ8IVW1 177 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 C17orf47Q8NEP4 570 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 OR10S1Q8NGN2 331 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 SGMS2Q8NHU3 365 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 SLC26A1Q9H2B4 701 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 CXXC4Q9H2H0 198 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 ZFP64Q9NPA5 681 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 MTCH2Q9Y6C9 303 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms