RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RBM39Q14498 530 aaKnown RBP15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 SRSF7Q16629 238 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 IDO2Q6ZQW0 420 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 ARRDC1Q8N5I2 433 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 OR5AP2Q8NGF4 316 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 PPP1R14BQ96C90 147 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 NEURL2Q9BR09 285 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 GINS4Q9BRT9 223 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 DNAJB11Q9UBS4 358 aa15.21■□□□□ 0.03
SMARCD3-202ENST00000356800 TENM4Q6N022 2769 aa15.21■□□□□ 0.02
SMARCD3-202ENST00000356800 IGKV1D-8A0A087WSZ0 117 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 OR2AT4A6NND4 320 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 J3QKU1 62 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 PSPNO60542 156 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 PMP2P02689 132 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 IFNA6P05013 189 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 PAN3Q58A45 887 aaKnown RBP15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 OR5H2Q8NGV7 314 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 HPS1Q92902 700 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 RIMS4Q9H426 269 aaPredicted RBP15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 ZNF222Q9UK12 451 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 LAMP3Q9UQV4 416 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 ALG5Q9Y673 324 aa15.2■□□□□ 0.02
SMARCD3-202ENST00000356800 C7orf66A4D0T2 115 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TMEM178BH3BS89 294 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 IFNL4K9M1U5 179 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 NAPSAO96009 420 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 IRF2P14316 349 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 PRDX2P32119 198 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 SHEQ5VZ18 495 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 Q6ZS49 121 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 PLPPR1Q8TBJ4 325 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 NEK7Q8TDX7 302 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 CCL17Q92583 94 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 PPA2Q9H2U2 334 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 SEBOXQ9HB31 216 aaPredicted RBP15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TMEM106BQ9NUM4 274 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 GLS2Q9UI32 602 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 FLVCR2Q9UPI3 526 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 IGHV1-69-2A0A0G2JMI3 117 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TMEM82A0PJX8 343 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 LRRC30A6NM36 301 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 POM121CA8CG34 1229 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 ARPC1BO15143 372 aaKnown RBP15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 PRAF2O60831 178 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TRAPPC2P0DI81 140 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TRAPPC2BP0DI82 140 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 OR3A3P47888 321 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 COL10A1Q03692 680 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 CHRFAM7AQ494W8 412 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TEX36Q5VZQ5 186 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 OVCH2Q7RTZ1 564 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 OR13C8Q8NGS7 320 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 ANGPTL6Q8NI99 470 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 ETAA1Q9NY74 926 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 ANXA10Q9UJ72 324 aa15.19■□□□□ 0.02
SMARCD3-202ENST00000356800 TRBV6-6A0A0A6YYG2 114 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 CSN2P05814 226 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 CARTPTQ16568 116 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 SCGB2B2Q4G0G5 96 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 STUMQ69YW2 141 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 SP5Q6BEB4 398 aaPredicted RBP15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 C20orf204Q6ZNR8 217 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 C17orf107Q6ZR85 190 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 DEFB108BQ8NET1 73 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 MED30Q96HR3 178 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 PLEKHF2Q9H8W4 249 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 TMEM165Q9HC07 324 aa15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 FBXO9Q9UK97 447 aaPredicted RBP15.18■□□□□ 0.02
SMARCD3-202ENST00000356800 A0A0A6YYJ9 748 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 OOEPA6NGQ2 149 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 LYNX1G3V0Z9 82 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 ZNF737O75373 536 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 LYNX1P0DP58 116 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 COL8A2P25067 703 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 MDH2P40926 338 aaKnown RBP15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 OR3A1P47881 315 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 TLE4Q04727 773 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 ATXN7L3Q14CW9 347 aaPredicted RBP15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 CDK10Q15131 360 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 GRK1Q15835 563 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 MRPL30Q8TCC3 161 aaKnown RBP15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 GIMAP1Q8WWP7 306 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 SHARPINQ9H0F6 387 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 RAB1BQ9H0U4 201 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 GHITMQ9H3K2 345 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 ZNF286AQ9HBT8 521 aa15.17■□□□□ 0.02
SMARCD3-202ENST00000356800 HMX3A6NHT5 357 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 IL5P05113 134 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 MUC1P15941 1255 aaPredicted RBP15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 GABRA2P47869 451 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 ARPC4P59998 168 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 TMEM17Q86X19 198 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 C1orf87Q8N0U7 546 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 GAPTQ8N292 157 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 TERB2Q8NHR7 220 aa15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 ALX4Q9H161 411 aaPredicted RBP15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 CLEC4MQ9H2X3 399 aaPredicted RBP15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 CHMP1AQ9HD42 196 aaPredicted RBP15.16■□□□□ 0.02
SMARCD3-202ENST00000356800 AKAP6Q13023 2319 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms