RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZNF519Q8TB69 540 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 LPAR5Q9H1C0 372 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 NPTNQ9Y639 398 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 LOC101059948A0A1B0GTJ6 334 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 NAAAQ02083 359 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 TUSC5Q8IXB3 177 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 WDR13Q9H1Z4 485 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 OR51I2Q9H344 312 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 MS4A5Q9H3V2 200 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.69
COLCA1-201ENST00000355430 RBFOX3A6NFN3 312 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 DNPH1O43598 174 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 Q8IYB0 196 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 IL17BQ9UHF5 180 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 LAMP3Q9UQV4 416 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 PTPRDP23468 1912 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 AP4M1O00189 453 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 EFEMP2O95967 443 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 DYNLT3P51808 116 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 H3F3AP84243 136 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 PMP22Q01453 160 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 CLEC2AQ6UVW9 174 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 LIAT1Q6ZQX7 453 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 LURAP1Q96LR2 239 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 LIPGQ9Y5X9 500 aa10.77□□□□□ -0.69
COLCA1-201ENST00000355430 RTL8BQ17RB0 113 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 BAGE3Q86Y29 109 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 BAGE2Q86Y30 109 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ACTR3CQ9C0K3 210 aaPredicted RBP10.76□□□□□ -0.69
COLCA1-201ENST00000355430 G6PC2Q9NQR9 355 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 CLEC18AA5D8T8 446 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ACKR3P25106 362 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ZP4Q12836 540 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 CLEC18CQ8NCF0 446 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 RIMS4Q9H426 269 aaPredicted RBP10.76□□□□□ -0.69
COLCA1-201ENST00000355430 M0QZ24 198 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 CYTIPO60759 359 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ISG15P05161 165 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 PGA3P0DJD8 388 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 RAB5AP20339 215 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 SULT1A1P50225 295 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 PPP1CBP62140 327 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
COLCA1-201ENST00000355430 VAX1Q5SQQ9 334 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 TBC1D26Q86UD7 250 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 OR10P1Q8NGE3 313 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 A0A1W2PPQ1 181 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 AQP7P3A6NL99 342 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 TGOLN2O43493 480 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 RPS16P62249 146 aaKnown RBP10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF816Q0VGE8 651 aaPredicted RBP10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ANKRD55Q3KP44 614 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 PIGYQ3MUY2 71 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 PABPC1L2AQ5JQF8 200 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 OR6S1Q8NH40 331 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 ADIPOR1Q96A54 375 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 TLNRD1Q9H1K6 362 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 GNB4Q9HAV0 340 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
COLCA1-201ENST00000355430 METTL15P1P0C7V9 234 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 CCL2P13500 99 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 PRDX4Q13162 271 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 TGFBR3LH3BV60 316 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 CD74P04233 296 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 FGF7P21781 194 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 CD200P41217 278 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 LINC00114Q6XXX2 140 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 SLC2A9Q9NRM0 540 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 A8MXK9 166 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 MS4A18H0YCH9 400 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 CALCRP30988 508 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 FGF8P55075 233 aaPredicted RBP10.75□□□□□ -0.69
COLCA1-201ENST00000355430 GNG3P63215 75 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 MS4A18Q3C1V0 323 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 OR2M3Q8NG83 312 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 OR8B3Q8NGG8 313 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 ADGRG7Q96K78 797 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 OR10C1Q96KK4 312 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 OR8B2Q96RD0 313 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 GFI1Q99684 422 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 FOXD3Q9UJU5 478 aaPredicted RBP10.75□□□□□ -0.69
COLCA1-201ENST00000355430 F6UZH7 168 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF468Q5VIY5 522 aaPredicted RBP10.75□□□□□ -0.69
COLCA1-201ENST00000355430 FDX2Q6P4F2 183 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 MRGPRGQ86SM5 289 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 BTF3L4Q96K17 158 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF251Q9BRH9 671 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 HS3ST3B1Q9Y662 390 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 KCNMB2Q9Y691 235 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 PRR32B1ATL7 298 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 PHOX2AO14813 284 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 PRAMEF5Q5TYX0 476 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 PRAMEF6Q5VXH4 476 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 LINC00518Q8N0U6 118 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 TMEM251Q8N6I4 163 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 UCN2Q96RP3 112 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms