RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IFNA21P01568 189 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 CELA2AP08217 269 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 DANCRP0C864 163 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 CD81P60033 236 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 CSNK2A1P68400 391 aaPredicted RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 SPEM2Q0P670 501 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 GUSBP11Q6P575 273 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 SGPP2Q8IWX5 399 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 CSNK2A3Q8NEV1 391 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 MRGPRX4Q96LA9 322 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 TP53RKQ96S44 253 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 WDFY4Q6ZS81 3184 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 M0QZ24 198 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 HPRT1P00492 218 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 LCATP04180 440 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 ZNF43P17038 809 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 CLN3Q13286 438 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 MPV17LQ2QL34 196 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 TSPO2Q5TGU0 170 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 POC1AQ8NBT0 407 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 ARHGAP5-AS1Q96IT6 56 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 CHRNA10Q9GZZ6 450 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 RAB18Q9NP72 206 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 MYOZ1Q9NP98 299 aaPredicted RBP8.16□□□□□ -1.1
SMG6-202ENST00000354901 ALKBH4Q9NXW9 302 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 POLR3KQ9Y2Y1 108 aaPredicted RBP8.16□□□□□ -1.1
SMG6-202ENST00000354901 A0A0A6YYD4 124 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 HSD17B6O14756 317 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 GPR137BO60478 399 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 NXPH2O95156 264 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 IGHG1P01857 330 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 GLIPR1P48060 266 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 RUNX1Q01196 453 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 TDRG1Q3Y452 100 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 ZNF845Q96IR2 970 aaPredicted RBP8.16□□□□□ -1.1
SMG6-202ENST00000354901 SYT3Q9BQG1 590 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 TMEM59Q9BXS4 323 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 OR2J1Q9GZK6 312 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 NCOR1P1Q9H4R4 102 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 SRPK3Q9UPE1 567 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 B3GALT5Q9Y2C3 310 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 HLA-GP17693 338 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 CFPP27918 469 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 CLDN17P56750 224 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 FXYD4P59646 89 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 RBX1P62877 108 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 GPR157Q5UAW9 335 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 LEMD1Q68G75 181 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 RHBDD2Q6NTF9 364 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 NFAM1Q8NET5 270 aaPredicted RBP8.16□□□□□ -1.1
SMG6-202ENST00000354901 CDX2Q99626 313 aaPredicted RBP8.16□□□□□ -1.1
SMG6-202ENST00000354901 LPAR5Q9H1C0 372 aa8.16□□□□□ -1.1
SMG6-202ENST00000354901 A0A1W2PNV4 684 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 A0A1W2PR80 420 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 E9PLN8 166 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 CLDN34H7C241 214 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 RAD51DO75771 328 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 THBS4P35443 961 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 HLA-DRB3P79483 266 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 PLPPR5Q32ZL2 321 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 C1QL2Q7Z5L3 287 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 YPEL4Q96NS1 127 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 DEFB126Q9BYW3 111 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 C14orf166Q9Y224 244 aaKnown RBP8.15□□□□□ -1.1
SMG6-202ENST00000354901 RHBDD3Q9Y3P4 386 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 CACNA1DQ01668 2161 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 RPL36A-HNRNPH2H7BZ11 118 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 BPNT1O95861 308 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 FGF8P55075 233 aaPredicted RBP8.15□□□□□ -1.1
SMG6-202ENST00000354901 MRPS34P82930 218 aaKnown RBP8.15□□□□□ -1.1
SMG6-202ENST00000354901 ZP4Q12836 540 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 PHF19Q5T6S3 580 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 LCN15Q6UWW0 184 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 SLC35E3Q7Z769 313 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 LYPD6Q86Y78 171 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 ST6GALNAC3Q8NDV1 305 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 NOXO1Q8NFA2 376 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 OR10A7Q8NGE5 316 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 PIGTQ969N2 578 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 PATZ1Q9HBE1 687 aaKnown RBP8.15□□□□□ -1.1
SMG6-202ENST00000354901 COLQQ9Y215 455 aaPredicted RBP8.15□□□□□ -1.1
SMG6-202ENST00000354901 SELENOKQ9Y6D0 94 aa8.15□□□□□ -1.1
SMG6-202ENST00000354901 A0A0U1RQK1 487 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 A8MXE2 369 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 PPP5D1E7EU14 171 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 BRS3P32247 399 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 TMEM50BP56557 158 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 SUPT4H1P63272 117 aaKnown RBP8.15□□□□□ -1.11
SMG6-202ENST00000354901 QRFPP83859 136 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 FAM3AP98173 230 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 PCK2Q16822 640 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 MEX3BQ6ZN04 569 aaKnown RBP8.15□□□□□ -1.11
SMG6-202ENST00000354901 MYPOPQ86VE0 399 aaPredicted RBP8.15□□□□□ -1.11
SMG6-202ENST00000354901 OR5AS1Q8N127 324 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 OR51T1Q8NGJ9 327 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 PGAM5Q96HS1 289 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms