RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 RIPPLY2Q5TAB7 128 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 S100A7AQ86SG5 101 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
SMC6-201ENST00000351948 PIN1P1O15428 100 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 JTBO76095 146 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 IL5P05113 134 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 HNF1AP20823 631 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 GGNBP1Q5YKI7 109 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 ZDHHC22Q8N966 263 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 KLF14Q8TD94 323 aaPredicted RBP11.87□□□□□ -0.51
SMC6-201ENST00000351948 MALSU1Q96EH3 234 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 ZNF665Q9H7R5 613 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 NAA60Q9H7X0 242 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 GZMKP49863 264 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 TMEM230Q96A57 120 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 FAM206AQ9NX38 181 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 ZNF724A8MTY0 619 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 TOX4O94842 621 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 SFT2D2O95562 160 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 HOXD4P09016 255 aaPredicted RBP11.87□□□□□ -0.51
SMC6-201ENST00000351948 PRDX2P32119 198 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
SMC6-201ENST00000351948 ERVS71-1P61550 626 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 RPL31P62899 125 aaKnown RBP11.87□□□□□ -0.51
SMC6-201ENST00000351948 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 SOX7Q9BT81 388 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 PPIAL4EA0A075B759 164 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 LOC102723996A0A087X1L8 192 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 PPIAL4DF5H284 164 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 PPIAL4FP0DN26 164 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 KCNJ3P48549 501 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 SCARB1Q8WTV0 552 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 MISP3Q96FF7 219 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 POM121L2Q96KW2 1035 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 ELF5Q9UKW6 265 aaPredicted RBP11.87□□□□□ -0.51
SMC6-201ENST00000351948 PPIAL4AQ9Y536 164 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
SMC6-201ENST00000351948 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 KLF4O43474 513 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 PPYP01298 95 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 ACKR3P25106 362 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 ADIRFQ15847 76 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 KIF26BQ2KJY2 2108 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 OR14K1Q8NGZ2 314 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 WIPI2Q9Y4P8 454 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 ZNF407Q9C0G0 2248 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 RBM11P57052 281 aaKnown RBP11.86□□□□□ -0.51
SMC6-201ENST00000351948 GSX2Q9BZM3 304 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 MTCH1Q9NZJ7 389 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 CBR1P16152 277 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 RAB5BP61020 215 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 NANPQ8TBE9 248 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 LHX4Q969G2 390 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 PCDHGA9Q9Y5G4 932 aaKnown RBP11.86□□□□□ -0.51
SMC6-201ENST00000351948 DOCK7Q96N67 2140 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 NEURL1O76050 574 aa11.86□□□□□ -0.51
SMC6-201ENST00000351948 CYB5R3P00387 301 aaPredicted RBP11.86□□□□□ -0.51
SMC6-201ENST00000351948 SLC25A10Q9UBX3 287 aaPredicted RBP11.86□□□□□ -0.51
SMC6-201ENST00000351948 FAM24AA6NFZ4 105 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 HRASP01112 189 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 OR10J4P0C629 311 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 METTL15P1P0C7V9 234 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 SLC25A6P12236 298 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
SMC6-201ENST00000351948 PSMB3P49720 205 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 BAP18Q8IXM2 172 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 MED30Q96HR3 178 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
SMC6-201ENST00000351948 SAV1Q9H4B6 383 aaPredicted RBP11.85□□□□□ -0.51
SMC6-201ENST00000351948 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 PCNX2A6NKB5 2137 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 OOEPA6NGQ2 149 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 PLA2G10O15496 165 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 FGF7P21781 194 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 POLR2GP62487 172 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMC6-201ENST00000351948 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 URGCP-MRPS24S4R325 110 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 RBP4P02753 201 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 ADH4P08319 380 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 ZNF708P17019 499 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 SLC6A1P30531 599 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 PRRX1P54821 245 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 UBE2G2P60604 165 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 C9orf106Q8NAJ2 232 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 MOB3AQ96BX8 217 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 GPHA2Q96T91 129 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 G6PC2Q9NQR9 355 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 KCNK7Q9Y2U2 307 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 TICRRQ7Z2Z1 1910 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 RAB7AP51149 207 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 OR2B8PP59922 312 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 UBE2V2Q15819 145 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 IGSF11Q5DX21 431 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 C11orf87Q6NUJ2 197 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 CLEC18BQ6UXF7 455 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms