RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 K7N7A8 449 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 NKX2-1P43699 371 aaPredicted RBP15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 ARF1P84077 181 aaKnown RBP15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 RUNX1Q01196 453 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 IZUMO4Q1ZYL8 232 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 TRIM61Q5EBN2 209 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 ACER2Q5QJU3 275 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 ABLIM2Q6H8Q1 611 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 C11orf1Q9H5F2 150 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 KCNJ16Q9NPI9 418 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 CCL28Q9NRJ3 127 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 GPR179Q6PRD1 2367 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 IGKV1-6A0A0C4DH72 117 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 NGFP01138 241 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 CYC1P08574 325 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 DPPA2Q7Z7J5 298 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 ZNF100Q8IYN0 542 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 SELENOHQ8IZQ5 122 aaKnown RBP15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 SLC35B3Q9H1N7 401 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 PRDM6Q9NQX0 595 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 MTCH1Q9NZJ7 389 aa15.53■□□□□ 0.08
PTP4A3-202ENST00000349124 C5orf49A4QMS7 147 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 MT-ND4LP03901 98 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 SULT1A1P50225 295 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 CCDC71LQ8N9Z2 235 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 KCNE4Q8WWG9 221 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 C1QTNF5Q9BXJ0 243 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 DNAJC13O75165 2243 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 RPL36A-HNRNPH2H7BZ11 118 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 S100A6P06703 90 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 PRDX4Q13162 271 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 C20orf204Q6ZNR8 217 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 TMEM252Q8N6L7 170 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 HES7Q9BYE0 225 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 IFT22Q9H7X7 185 aa15.52■□□□□ 0.08
PTP4A3-202ENST00000349124 SLC22A20A6NK97 555 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF727A8MUV8 499 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 IFNA4P05014 189 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 AGAP20933 346 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 FABP9Q0Z7S8 132 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 HAGHQ16775 308 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 TIPARPQ7Z3E1 657 aaKnown RBP15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 OR5C1Q8NGR4 320 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 NEK7Q8TDX7 302 aa15.52■□□□□ 0.07
PTP4A3-202ENST00000349124 KNTC1P50748 2209 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 DNPH1O43598 174 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 SYNGR1O43759 233 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 LILRA1O75019 489 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF14P17017 642 aaPredicted RBP15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 RAB5AP20339 215 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 PCBD1P61457 104 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 OR51B6Q9H340 312 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 CALHM2Q9HA72 323 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 Q9N2K0 584 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 NOSIPQ9Y314 301 aaKnown RBP15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 NBEAQ8NFP9 2946 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 DYNLT3P51808 116 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 HMGN3Q15651 99 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 SPSB3Q6PJ21 355 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 TCFL5Q9UL49 500 aa15.51■□□□□ 0.07
PTP4A3-202ENST00000349124 KIAA1549Q9HCM3 1950 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 TRAV39A0A0B4J263 110 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 MRPL33O75394 65 aaKnown RBP15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 TK1P04183 234 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 NQO2P16083 231 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 LPAL2Q16609 132 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 RIPPLY2Q5TAB7 128 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 TUSC5Q8IXB3 177 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 COMMD1Q8N668 190 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF565Q8N9K5 539 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 SPSB4Q96A44 273 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF552Q9H707 407 aaPredicted RBP15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 PLSCR2Q9NRY7 297 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF732B4DXR9 585 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 H3BP45 60 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 HS3ST1O14792 307 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 CHST1O43916 411 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 CYTIPO60759 359 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF806P0C7X5 589 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 GFRA1P56159 465 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 B2MP61769 119 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 FOXO1Q12778 655 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF154Q13106 437 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF561Q8N587 486 aa15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 REPIN1Q9BWE0 567 aaKnown RBP15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 STRAPQ9Y3F4 350 aaKnown RBP15.5■□□□□ 0.07
PTP4A3-202ENST00000349124 A0A0G2JRQ6 117 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 PAX6P26367 422 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 SOHLH1Q5JUK2 328 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 COLCA1Q6ZS62 124 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 C17orf78Q8N4C9 275 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 TMEM56Q96MV1 263 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 SIGLEC12Q96PQ1 595 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 TMEM56-RWDD3S4R434 201 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 DOCK10Q96BY6 2186 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 CDS2O95674 445 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 NAPSAO96009 420 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 MYPOPQ86VE0 399 aaPredicted RBP15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 TMEM105Q8N8V8 129 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 PLPPR1Q8TBJ4 325 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms