RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 RNF144BQ7Z419 303 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 ANGPTL5Q86XS5 388 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 TECTBQ96PL2 329 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 TBX15Q96SF7 602 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 NUDT16L1Q9BRJ7 211 aaKnown RBP13.28□□□□□ -0.28
RAB5C-201ENST00000346213 RTL8AQ9BWD3 113 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 ZNF732B4DXR9 585 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 SYNGR1O43759 233 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 HCKP08631 526 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 GSTT2BP0CG30 244 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 HILS1P60008 231 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 FGF12P61328 243 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 MOB3CQ70IA8 216 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 OR2W3Q7Z3T1 314 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 NANPQ8TBE9 248 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 GCDHQ92947 438 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-201ENST00000346213 UPRTQ96BW1 309 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 GAFA1Q96PS6 74 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 DUX5Q96PT3 197 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 MICU1Q9BPX6 476 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 TRAV40A0A0B4J280 105 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 ANKRD20A5PA0PJZ0 165 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 METTL21EPA6NDL7 271 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 TMEM14DPA8MWL7 114 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 SULT1C2O00338 296 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 PLATP00750 562 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 UBBP0CG47 229 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 VSIG8P0DPA2 414 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 RIPPLY1Q0D2K3 151 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 UBE2V2Q15819 145 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 CEACAM21Q3KPI0 293 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 RSBN1Q5VWQ0 802 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-201ENST00000346213 RUSC1-AS1Q66K80 236 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 RAB12Q6IQ22 244 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 SIGLECL1Q8N7X8 197 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 DEDD2Q8WXF8 326 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 AQP3Q92482 292 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 CREB3L1Q96BA8 519 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 DPAGT1Q9H3H5 408 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 ELL3Q9HB65 397 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-201ENST00000346213 COPZ2Q9P299 210 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 KLK11Q9UBX7 282 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 MTFP1Q9UDX5 166 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 ZNF222Q9UK12 451 aa13.27□□□□□ -0.29
RAB5C-201ENST00000346213 MRPS28Q9Y2Q9 187 aaKnown RBP13.27□□□□□ -0.29
RAB5C-201ENST00000346213 IGKV1D-17A0A075B6S4 117 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 TRAV38-1A0A0B4J264 116 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 RBBP9O75884 186 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 SCGNO76038 276 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 PTHLHP12272 177 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 PRSS3P35030 304 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 SSBP1Q04837 148 aaKnown RBP13.26□□□□□ -0.29
RAB5C-201ENST00000346213 UNC119Q13432 240 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 PLCXD3Q63HM9 321 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 AWAT2Q6E213 333 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 OR10K2Q6IF99 312 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 BRD3OSQ6XYD6 125 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 CALHM1Q8IU99 346 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 ANGPTL6Q8NI99 470 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 FAM46BQ96A09 425 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 SPACA5Q96QH8 159 aa13.26□□□□□ -0.29
RAB5C-201ENST00000346213 PQLC2LA1A4F0 135 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 F8VVB4 439 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 F8VWA3 439 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 TMPRSS2O15393 492 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 CEBPDP49716 269 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-201ENST00000346213 KISS1Q15726 138 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 CRIP3Q6Q6R5 217 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 GLIPR1L1Q6UWM5 242 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 BTN2A1Q7KYR7 527 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 NLRC3Q7RTR2 1065 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 PNLDC1Q8NA58 520 aaKnown RBP13.25□□□□□ -0.29
RAB5C-201ENST00000346213 GPER1Q99527 375 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 SIRPDQ9H106 197 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 NEK6Q9HC98 313 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 HRASLSQ9HDD0 168 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 TAS2R8Q9NYW2 309 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 GHRLQ9UBU3 117 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 NUP50Q9UKX7 468 aa13.25□□□□□ -0.29
RAB5C-201ENST00000346213 TMEM210A6NLX4 147 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 INMT-MINDY4F8WBC2 141 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 TRAPPC2P0DI81 140 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 TRAPPC2BP0DI82 140 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 HLA-DMAP28067 261 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 OR3A4PP47883 348 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 IKZF1Q13422 519 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 OLFML2AQ68BL7 652 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 HAGHLQ6PII5 290 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-201ENST00000346213 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 KCNG3Q8TAE7 436 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 GPX8Q8TED1 209 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 SPSB1Q96BD6 273 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 SCPEP1Q9HB40 452 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 NUBP2Q9Y5Y2 271 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 A0A0B4J293 547 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms