RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 R3HDM4Q96D70 268 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 COQ2Q96H96 371 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 GPR61Q9BZJ8 451 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 PPIL3Q9H2H8 161 aaKnown RBP9.97□□□□□ -0.81
SGCA-202ENST00000344627 FGF20Q9NP95 211 aaPredicted RBP9.97□□□□□ -0.81
SGCA-202ENST00000344627 MRPS18AQ9NVS2 196 aaKnown RBP9.97□□□□□ -0.81
SGCA-202ENST00000344627 CHCHD3Q9NX63 227 aaKnown RBP9.97□□□□□ -0.81
SGCA-202ENST00000344627 SMPD3Q9NY59 655 aaPredicted RBP9.97□□□□□ -0.81
SGCA-202ENST00000344627 TAS2R4Q9NYW5 299 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 OR6C3Q9NZP0 311 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 MEIKINA0A087WXM9 373 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 H0YHG0 523 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 LIMS3P0CW19 117 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 LIMS4P0CW20 117 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 MYL12AP19105 171 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 GDNFP39905 211 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 CEACAM3P40198 252 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 OR3A4PP47883 348 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 ETV1P50549 477 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 CDK5R1Q15078 307 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 OR2G6Q5TZ20 316 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 RPL22L1Q6P5R6 122 aaKnown RBP9.96□□□□□ -0.82
SGCA-202ENST00000344627 Q6ZS46 218 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 ZNF565Q8N9K5 539 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 OR51A2Q8NGJ7 313 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 CNIH3Q8TBE1 160 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 MRAPQ8TCY5 172 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 SGCDQ92629 289 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 S100A13Q99584 98 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 ZNF649Q9BS31 505 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 JAM3Q9BX67 310 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 BARHL1Q9BZE3 327 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 ZNF286AQ9HBT8 521 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
SGCA-202ENST00000344627 A0A1W2PRX2 142 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 IRGMA1A4Y4 181 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 ZNF729A6NN14 1252 aaPredicted RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 GABRPO00591 440 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 WBP4O75554 376 aaKnown RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 CDRT1O95170 752 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 CLIC3O95833 236 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 IGHV3-7P01780 117 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 CSTBP04080 98 aaKnown RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 CSN2P05814 226 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 DCKP27707 260 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 C21orf33P30042 268 aaPredicted RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 BDH1Q02338 343 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 MED21Q13503 144 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 DCTN2Q13561 401 aaKnown RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 PIGYQ3MUY2 71 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 C9orf152Q5JTZ5 239 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 CENPVQ7Z7K6 275 aaPredicted RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 PXT1Q8NFP0 134 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 RDH12Q96NR8 316 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 ZMAT5Q9UDW3 170 aaKnown RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 KIF25Q9UIL4 384 aa9.95□□□□□ -0.82
SGCA-202ENST00000344627 EXOSC1Q9Y3B2 195 aaKnown RBP9.95□□□□□ -0.82
SGCA-202ENST00000344627 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 KBTBD11-OT1A0A1B0GTJ5 212 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 FAM90A22PA8MWA6 464 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 BUB1B-PAK6H3BSN5 160 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 CD33P20138 364 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 MNDAP41218 407 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 CCDC58Q4VC31 144 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 ABCA11PQ4W5N1 156 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 TPTE2P1Q5T6R2 138 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 DDI2Q5TDH0 399 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 TTC23Q5W5X9 447 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 XAF1Q6GPH4 301 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 CCDC144NLQ6NUI1 221 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 OR51T1Q8NGJ9 327 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 RFESDQ8TAC1 157 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 RGP1Q92546 391 aaPredicted RBP9.94□□□□□ -0.82
SGCA-202ENST00000344627 LEAP2Q969E1 77 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 TMEM106AQ96A25 262 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 RPEQ96AT9 228 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 SLC25A33Q9BSK2 321 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 METTL9Q9H1A3 318 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 MMP28Q9H239 520 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 ST3GAL6Q9Y274 331 aa9.94□□□□□ -0.82
SGCA-202ENST00000344627 TRAV39A0A0B4J263 110 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 M0QZK8 103 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 OR7C1O76099 320 aaPredicted RBP9.93□□□□□ -0.82
SGCA-202ENST00000344627 IGLV1-47P01700 117 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 LPLP06858 475 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 SERPINA2P20848 420 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 CD34P28906 385 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 BDKRB2P30411 391 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 ZNF93P35789 620 aaPredicted RBP9.93□□□□□ -0.82
SGCA-202ENST00000344627 GNG10P50151 68 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 SLC35A2P78381 396 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 CD83Q01151 205 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 IL13RA2Q14627 380 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms