RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 PMCHP20382 165 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 AGBL5Q8NDL9 886 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 MRPL24Q96A35 216 aaKnown RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 GMPPAQ96IJ6 420 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 MDC1Q14676 2089 aaKnown RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 A0A1W2PNV4 684 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 A0A1W2PPC4 97 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 FGF16O43320 207 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 PNLIPP16233 465 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 GPR12P47775 334 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 SPCS3P61009 180 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 GTF2H5Q6ZYL4 71 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 PTPMT1Q8WUK0 201 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 PRR13Q9NZ81 148 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM229AB2RXF0 380 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 GRPP07492 148 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 FAM78BQ5VT40 261 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TRAT1Q6PIZ9 186 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 SPACA9Q96E40 222 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TXNDC17Q9BRA2 123 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM222Q9H0R3 208 aa4.21□□□□□ -1.74
CSMD3-203ENST00000343508 ERRFI1Q9UJM3 462 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-203ENST00000343508 IGHV3-20A0A0C4DH32 117 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 LIPT2A6NK58 231 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 CHRNA7P36544 502 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 GAS1P54826 345 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM50BP56557 158 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ZNF880Q6PDB4 577 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FOXB1Q99853 325 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 TGIF2-C20orf24A0A0A6YYL0 155 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 IGHV5-51A0A0C4DH38 117 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 A0A1B0GTI1 187 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 MOSPD3O75425 235 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FHL5Q5TD97 284 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 C9orf135Q5VTT2 229 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SLC25A22Q9H936 323 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 NAGKQ9UJ70 344 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 GYPAP02724 150 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 PMP22Q01453 160 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ANKRD55Q3KP44 614 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ATRAIDQ6UW56 229 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 RNF126Q9BV68 326 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ANKRD10Q9NXR5 420 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 DOCK6Q96HP0 2047 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 CACNA1CQ13936 2221 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 CD99P14209 185 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 P2RY4P51582 365 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FGF8P55075 233 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-203ENST00000343508 UBE2G2P60604 165 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SLC35E1Q96K37 410 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 WFIKKN1Q96NZ8 548 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 LOC102723971A0A1B0GUV8 181 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SIRPB1O00241 398 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 CER1O95813 267 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SMIM10L1P0DMW3 83 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 PAX5Q02548 391 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 BATF2Q8N1L9 274 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SMIM10Q96HG1 83 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 KCNK17Q96T54 332 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 PAM16Q9Y3D7 125 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 GOLT1BQ9Y3E0 138 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 E9PQ18 207 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FAM219AQ8IW50 185 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ZBTB34Q8NCN2 500 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 LANCL2Q9NS86 450 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 IL17BQ9UHF5 180 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 OR2W5A6NFC9 320 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 AQP7O14520 342 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 CXorf1O96002 111 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 POU2F2P09086 479 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 MRPL30Q8TCC3 161 aaKnown RBP4.2□□□□□ -1.74
CSMD3-203ENST00000343508 RDH5Q92781 318 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SH3BGRL3Q9H299 93 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FAM60AQ9NP50 221 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FAM206AQ9NX38 181 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 SLC45A2Q9UMX9 530 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 MRPS2Q9Y399 296 aaKnown RBP4.2□□□□□ -1.74
CSMD3-203ENST00000343508 IL2RAP01589 272 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 GFERP55789 205 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 UCP3P55916 312 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 OR52M1Q8NGK5 317 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ESRP2Q9H6T0 727 aaKnown RBP4.2□□□□□ -1.74
CSMD3-203ENST00000343508 OR10J4P0C629 311 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 LINC00114Q6XXX2 140 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 GAPTQ8N292 157 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 BOD1Q96IK1 185 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 MAP1LC3CQ9BXW4 147 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 GSX1Q9H4S2 264 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM242Q9NWH2 141 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 LOC390937A0A1W2PQ73 354 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 NDUFA2O43678 99 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FCGR3AP08637 254 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 CD46P15529 392 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 BRS3P32247 399 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 KIR2DS2P43631 304 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 MEF2BQ02080 365 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-203ENST00000343508 DMRTC1Q5HYR2 192 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 FBXL14Q8N1E6 418 aa4.2□□□□□ -1.74
CSMD3-203ENST00000343508 ZNF738Q8NE65 137 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms