RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OR10C1Q96KK4 312 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 SOX7Q9BT81 388 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 COMMD5Q9GZQ3 224 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 OR51I2Q9H344 312 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 SSUH2Q9Y2M2 353 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 LIPGQ9Y5X9 500 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 RBFOX3A6NFN3 312 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 C1QL1O75973 258 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 CRYBA1P05813 215 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 LINC00271P0C7V0 271 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 ZNF92Q03936 586 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 TIGITQ495A1 244 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 DCAF10Q5QP82 559 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 SLC36A1Q7Z2H8 476 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 IER2Q9BTL4 223 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 C5orf66Q9H5L9 145 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 PARP11Q9NR21 331 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 TINAGQ9UJW2 476 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 A0A1W2PNV4 684 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 M0R1B8 84 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 ZNF17P17021 662 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 FGF7P21781 194 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 NOVA1P51513 510 aaKnown RBP6.27□□□□□ -1.41
VCAN-202ENST00000342785 RBM11P57052 281 aaKnown RBP6.27□□□□□ -1.41
VCAN-202ENST00000342785 ANKRD55Q3KP44 614 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 FAM74A3Q4VXF1 159 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 OR5A2Q8NGI9 324 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 SAP25Q8TEE9 199 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 RTN4RQ9BZR6 473 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 NPTNQ9Y639 398 aa6.27□□□□□ -1.41
VCAN-202ENST00000342785 CYC1P08574 325 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 PPP1CBP62140 327 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 UNC119Q13432 240 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 UBE2V2Q15819 145 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 Q3ZCU0 254 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 SMUG1Q53HV7 270 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 MRGPRDQ8TDS7 321 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 CDX2Q99626 313 aaPredicted RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 PRRG2O14669 202 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 ABCD4O14678 606 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 GALR2O43603 387 aaPredicted RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 IGLV3-19P01714 112 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 MGST1P10620 155 aaKnown RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 FGF5P12034 268 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 BCL3P20749 454 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 GABRA4P48169 554 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 ZNF90Q03938 601 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 NUFIP2Q7Z417 695 aaKnown RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 TAAR6Q96RI8 345 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 NPAS1Q99742 590 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 RSPO3Q9BXY4 272 aaPredicted RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 DECR2Q9NUI1 292 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 R4GN57 208 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 IGHV3-43A0A0B4J1X8 118 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 LOC101059948A0A1B0GTJ6 334 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 GAPDHP04406 335 aaKnown RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 IGHV3-43DP0DP04 118 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 SLC25A6P12236 298 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 ATP6V0CP27449 155 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 ZNF154Q13106 437 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 OR2Z1Q8NG97 314 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 ZNF488Q96MN9 340 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 GPR87Q9BY21 358 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 TLNRD1Q9H1K6 362 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 SLC2A8Q9NY64 477 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 KIF26BQ2KJY2 2108 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 OR7C2O60412 319 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 NPIPB7O75200 414 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 MST1P26927 711 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 NHLH2Q02577 135 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 SLC35E1Q96K37 410 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 TOLLIPQ9H0E2 274 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 OR2D2Q9H210 308 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 MFNGO00587 321 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 ZNHIT1O43257 154 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 FCGR3BO75015 233 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 MUC1P15941 1255 aaPredicted RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 THBS3P49746 956 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 DYNLT3P51808 116 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 HIKESHIQ53FT3 197 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 OR2W1Q9Y3N9 320 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 DOCK4Q8N1I0 1966 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 PSME4Q14997 1843 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 HEATR5BQ9P2D3 2071 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 DHRS7CA6NNS2 312 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 RPL36A-HNRNPH2H7BZ11 118 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 SPRY3O43610 288 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 FGF2P09038 288 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 MDH2P40926 338 aaKnown RBP6.26□□□□□ -1.41
VCAN-202ENST00000342785 HLA-DRB3P79483 266 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 WFDC8Q8IUA0 241 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 CORO2AQ92828 525 aa6.26□□□□□ -1.41
VCAN-202ENST00000342785 B4E171 279 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 SBF1O95248 1867 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 TSPAN7P41732 249 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 FOXO1Q12778 655 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IGSF11Q5DX21 431 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 HES3Q5TGS1 186 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 TMEM252Q8N6L7 170 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms