RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.36
TPM3-208ENST00000341485 KRTCAP3Q53RY4 240 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 C5orf24Q7Z6I8 188 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 OR4A4PQ8NGN8 299 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 GLYATL2Q8WU03 294 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 MMP26Q9NRE1 261 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 MTCH1Q9NZJ7 389 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 ZFHX4Q86UP3 3567 aa12.83□□□□□ -0.36
TPM3-208ENST00000341485 APC2O95996 2303 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 SLC34A2O95436 690 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 PPYP01298 95 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 ADCYAP1P18509 176 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 EIF5AP63241 154 aaKnown RBP12.82□□□□□ -0.36
TPM3-208ENST00000341485 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 OR5T2Q8NGG2 359 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 OR1K1Q8NGR3 316 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 URB1O60287 2271 aaKnown RBP12.82□□□□□ -0.36
TPM3-208ENST00000341485 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 WNT5AP41221 380 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 Q6ZS49 121 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 LGI3Q8N145 548 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 NANOS1Q8WY41 292 aaKnown RBP12.82□□□□□ -0.36
TPM3-208ENST00000341485 SMIM8Q96KF7 97 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 SYT3Q9BQG1 590 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 Q9N2K0 584 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 RCC2Q9P258 522 aaKnown RBP12.82□□□□□ -0.36
TPM3-208ENST00000341485 MED12LQ86YW9 2145 aa12.82□□□□□ -0.36
TPM3-208ENST00000341485 FAM74A7A6NL05 159 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 NUDT19A8MXV4 375 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 TRIM77I1YAP6 450 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 PHF1O43189 567 aaPredicted RBP12.81□□□□□ -0.36
TPM3-208ENST00000341485 SYNGR1O43759 233 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 ATG12O94817 140 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 DIRAS3O95661 229 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 IL18BPO95998 194 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 NAPSAO96009 420 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 TMEM33P57088 247 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 PLP2Q04941 152 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 GUSBP1Q15486 140 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 CISD2Q8N5K1 135 aaKnown RBP12.81□□□□□ -0.36
TPM3-208ENST00000341485 CCDC71LQ8N9Z2 235 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
TPM3-208ENST00000341485 BSCL2Q96G97 398 aaPredicted RBP12.81□□□□□ -0.36
TPM3-208ENST00000341485 TP53RKQ96S44 253 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 SMIM3Q9BZL3 60 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 NKX6-2Q9C056 277 aaPredicted RBP12.81□□□□□ -0.36
TPM3-208ENST00000341485 LOC400499M0QZD8 3231 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 LILRA1O75019 489 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 WDR1O75083 606 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 GAPDHP04406 335 aaKnown RBP12.81□□□□□ -0.36
TPM3-208ENST00000341485 LPAR6P43657 344 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 PJVKQ0ZLH3 352 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 IL34Q6ZMJ4 242 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 DPPA2Q7Z7J5 298 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 OR5A2Q8NGI9 324 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 OR52M1Q8NGK5 317 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 ERGIC1Q969X5 290 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 PLEKHA2Q9HB19 425 aa12.81□□□□□ -0.36
TPM3-208ENST00000341485 DOCK7Q96N67 2140 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 E5RGE8 158 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 TRAPPC2LH3BP13 241 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 SCTP09683 121 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 KIR2DL2P43627 348 aaPredicted RBP12.8□□□□□ -0.36
TPM3-208ENST00000341485 SULT1A2P50226 295 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 TGFBR3Q03167 851 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 SRSF7Q16629 238 aaKnown RBP eCLIP12.8□□□□□ -0.363e-11■■■■□ 20.4
TPM3-208ENST00000341485 C1orf185Q5T7R7 199 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 EIF5AL1Q6IS14 154 aaKnown RBP12.8□□□□□ -0.36
TPM3-208ENST00000341485 VWA1Q6PCB0 445 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 CLEC9AQ6UXN8 241 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 MKXQ8IYA7 352 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 OR5P3Q8WZ94 311 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 HRH4Q9H3N8 390 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 OPA3Q9H6K4 179 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 ZDHHC8Q9ULC8 765 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 ACACAQ13085 2346 aa12.8□□□□□ -0.36
TPM3-208ENST00000341485 MBD3L4A6NDZ8 208 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 MBD3L3A6NE82 208 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 MBD3L5A6NJ08 208 aaPredicted RBP12.79□□□□□ -0.36
TPM3-208ENST00000341485 C1QTNF9BB2RNN3 333 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 PRSS44E7EML9 344 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 GPR31O00270 319 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 HSPB6O14558 160 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 MPPED1O15442 326 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 FBXO24O75426 580 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 C1QTNF9P0C862 333 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 DUSP1P28562 367 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 GNRHRP30968 328 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 APLNRP35414 380 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 FOXF2Q12947 444 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 HERPUD1Q15011 391 aa12.79□□□□□ -0.36
TPM3-208ENST00000341485 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms