RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OR11H6Q8NGC7 330 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 UFD1Q92890 307 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 IFT22Q9H7X7 185 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 BEX1Q9HBH7 125 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 ST3GAL6Q9Y274 331 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 MRPS28Q9Y2Q9 187 aaKnown RBP12.5□□□□□ -0.41
VAPA-201ENST00000340541 TRRAPQ9Y4A5 3859 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 FAM90A8PA6NJQ4 464 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 HSPB6O14558 160 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
VAPA-201ENST00000340541 ZNF780AO75290 641 aaPredicted RBP12.49□□□□□ -0.41
VAPA-201ENST00000340541 CLPXO76031 633 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 CRYBA1P05813 215 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 HSMCR30P0CW71 290 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 CGB3P0DN86 165 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 CGB7P0DN87 165 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 SERPINA2P20848 420 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 RPS25P62851 125 aaKnown RBP12.49□□□□□ -0.41
VAPA-201ENST00000340541 PAX5Q02548 391 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 SLC22A6Q4U2R8 563 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 PAN3Q58A45 887 aaKnown RBP12.49□□□□□ -0.41
VAPA-201ENST00000340541 KRBOX4Q5JUW0 171 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 LDLRAD2Q5SZI1 272 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 ZNF626Q68DY1 528 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 GLIPR1L1Q6UWM5 242 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 TMEM91Q6ZNR0 172 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 OR4F5Q8NH21 305 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 PHYHIPQ92561 330 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 MGLLQ99685 303 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
VAPA-201ENST00000340541 TRGV10A0A0A0MS01 117 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 FUOMA2VDF0 154 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 MEGF11A6BM72 1044 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 NDUFA7O95182 113 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 PAHP00439 452 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
VAPA-201ENST00000340541 UCHL1P09936 223 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 CD37P11049 281 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
VAPA-201ENST00000340541 PAX6P26367 422 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 GDNFP39905 211 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 RELBQ01201 579 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
VAPA-201ENST00000340541 RSBN1Q5VWQ0 802 aaPredicted RBP12.48□□□□□ -0.41
VAPA-201ENST00000340541 BAIAP2L2Q6UXY1 529 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 LHFPL4Q7Z7J7 247 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 TRAPPC6BQ86SZ2 158 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 DYNAPQ8N1N2 210 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 SUMF2Q8NBJ7 301 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 OR13D1Q8NGV5 346 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 DYRK2Q92630 601 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 S100A13Q99584 98 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 UQCC2Q9BRT2 126 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 DPAGT1Q9H3H5 408 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 NCOR1P1Q9H4R4 102 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 ACOT13Q9NPJ3 140 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 ING3Q9NXR8 418 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 SESN1Q9Y6P5 492 aa12.48□□□□□ -0.41
VAPA-201ENST00000340541 GPR137BO60478 399 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 OR7C1O76099 320 aaPredicted RBP12.47□□□□□ -0.41
VAPA-201ENST00000340541 GTF2F2P13984 249 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 SRMP19623 302 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 GABARAPL2P60520 117 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 EMX1Q04741 257 aaPredicted RBP12.47□□□□□ -0.41
VAPA-201ENST00000340541 GPR176Q14439 515 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 C17orf58Q2M2W7 97 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 AWAT2Q6E213 333 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 ZNF367Q7RTV3 350 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 DPCDQ9BVM2 203 aaPredicted RBP12.47□□□□□ -0.41
VAPA-201ENST00000340541 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 GAL3ST2Q9H3Q3 398 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 C1RLQ9NZP8 487 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 KIF25Q9UIL4 384 aa12.47□□□□□ -0.41
VAPA-201ENST00000340541 IGHV2-26A0A0B4J1V2 119 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 MRPS14O60783 128 aaKnown RBP12.46□□□□□ -0.41
VAPA-201ENST00000340541 ARG1P05089 322 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 OMGP23515 440 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 CDK2P24941 298 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 KCNJ3P48549 501 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 SSX1Q16384 188 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 AANATQ16613 207 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 HSD17B12Q53GQ0 312 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 UTF1Q5T230 341 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 OR13A1Q8NGR1 328 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 MRPS24Q96EL2 167 aaKnown RBP12.46□□□□□ -0.41
VAPA-201ENST00000340541 GFI1Q99684 422 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 Q9H521 79 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms