RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ATP6V1FQ16864 119 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 GPR157Q5UAW9 335 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 RTL6Q6ICC9 239 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 SSX7Q7RTT5 188 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 FAM220AQ7Z4H9 259 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 C17orf78Q8N4C9 275 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 TBX15Q96SF7 602 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 ADOQ96SZ5 270 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 CABLES2Q9BTV7 478 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 LPAR5Q9H1C0 372 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF703Q9H7S9 590 aaPredicted RBP4.84□□□□□ -1.64
CSDE1-202ENST00000339438 ELL3Q9HB65 397 aaPredicted RBP4.84□□□□□ -1.64
CSDE1-202ENST00000339438 MRPL22Q9NWU5 206 aaKnown RBP4.84□□□□□ -1.64
CSDE1-202ENST00000339438 CDV3Q9UKY7 258 aaKnown RBP4.84□□□□□ -1.64
CSDE1-202ENST00000339438 GPR34Q9UPC5 381 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 HIF3AQ9Y2N7 669 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 NSG2Q9Y328 171 aa4.84□□□□□ -1.64
CSDE1-202ENST00000339438 CRYM-AS1A6NIL9 109 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 TNFP01375 233 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 IGKV1D-16P01601 117 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 NBEAP1P0C6P0 100 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ESDP10768 282 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SSR2P43308 183 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SRSF1Q07955 248 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSDE1-202ENST00000339438 GPR18Q14330 331 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SGPP2Q8IWX5 399 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 OR52M1Q8NGK5 317 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ADAMTS18Q8TE60 1221 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 COL26A1Q96A83 441 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 DNAJA3Q96EY1 480 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 HRASLS2Q9NWW9 162 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 IGKV1D-8A0A087WSZ0 117 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 C20orf202A1L168 122 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SCDO00767 359 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF888P0CJ79 500 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-202ENST00000339438 CD38P28907 300 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 YPEL5P62699 121 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 IL24Q13007 206 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 RSPO4Q2I0M5 234 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-202ENST00000339438 RAB42Q8N4Z0 105 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ZFP62Q8NB50 900 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-202ENST00000339438 OR2A1Q8NGT9 310 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SLC37A2Q8TED4 501 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SSC4DQ8WTU2 575 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 TSEN15Q8WW01 171 aaKnown RBP4.83□□□□□ -1.64
CSDE1-202ENST00000339438 GPR146Q96CH1 333 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 SDSLQ96GA7 329 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 C18orf12Q96KH6 178 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 CLUHP3Q96NS8 147 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 TSPAN32Q96QS1 320 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 CTDSP1Q9GZU7 261 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF732B4DXR9 585 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 H7C1C5 153 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 CEACAM4O75871 244 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 OR2J2O76002 312 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 AGR2O95994 175 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ASAH2BP0C7U1 165 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 WT1P19544 449 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-202ENST00000339438 LCN6P62502 163 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ID2Q02363 134 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 EGR4Q05215 589 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF726P1Q15940 193 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 MEP1BQ16820 701 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 ZNF66Q6ZN08 573 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 LRTM2Q8N967 370 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 MFSD9Q8NBP5 474 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 OR4D5Q8NGN0 318 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 TMEM106BQ9NUM4 274 aa4.83□□□□□ -1.64
CSDE1-202ENST00000339438 IGHV2OR16-5A0A0B4J2B6 119 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 SOCS1O15524 211 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 LAMTOR5O43504 91 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 TNFSF14O43557 240 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 TLX3O43711 291 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 TCN2P20062 427 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 ASCL1P50553 236 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 UBE2NP61088 152 aaKnown RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 RHOGP84095 191 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 HHEXQ03014 270 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 HLA-BQ31612 363 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 C1orf140Q5VVS0 124 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 CBLN3Q6UW01 205 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 PRSS57Q6UWY2 283 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 WDFY1Q8IWB7 410 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 SNIP1Q8TAD8 396 aaKnown RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 PLPPR1Q8TBJ4 325 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 PTPMT1Q8WUK0 201 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 THRSPQ92748 146 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 SLC25A44Q96H78 314 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 SPACA7Q96KW9 195 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 AGMATQ9BSE5 352 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 ELOVL3Q9HB03 270 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 CISD1Q9NZ45 108 aaKnown RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 OR6C3Q9NZP0 311 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 C19orf53Q9UNZ5 99 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 DHDHQ9UQ10 334 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 LSM5Q9Y4Y9 91 aaKnown RBP4.82□□□□□ -1.64
CSDE1-202ENST00000339438 B3GALT1Q9Y5Z6 326 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 COX11Q9Y6N1 276 aa4.82□□□□□ -1.64
CSDE1-202ENST00000339438 DOCK10Q96BY6 2186 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms