RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DEGS1O15121 323 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 NXPH2O95156 264 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 CD8AP01732 235 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 S100A1P23297 94 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 NDUFA5Q16718 116 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 SWI5Q1ZZU3 235 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 NHLRC3Q5JS37 347 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 FOXRED2Q8IWF2 684 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 TPRX1Q8N7U7 411 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 LILRB4Q8NHJ6 448 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 MRPL30Q8TCC3 161 aaKnown RBP6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 BOD1Q96IK1 185 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 DMRTA2Q96SC8 542 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 PCDHB16Q9NRJ7 776 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 DECR2Q9NUI1 292 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 GSKIPQ9P0R6 139 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
SRFBP1-201ENST00000339397 TEX13DA0A0J9YY54 714 aaPredicted RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 LRP5LA4QPB2 252 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 RFPL4AA6NLU0 287 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 ATP6V1G2-DDX39BF2Z307 99 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 RFPL4AL1F8VTS6 287 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 TEX46H3BTG2 121 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 M0R233 179 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 OR5AC1P0C628 307 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PGA5P0DJD9 388 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF728P0DKX0 622 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 HOXB1P14653 301 aaPredicted RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 GNRHRP30968 328 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 C1QTNF12Q5T7M4 302 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 ALKAL2Q6UX46 152 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 TGIF2LYQ8IUE0 185 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 ZCCHC24Q8N2G6 241 aaKnown RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 OR2Z1Q8NG97 314 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 IL1F10Q8WWZ1 152 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 RRNAD1Q96FB5 475 aaKnown RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 SLX1AQ9BQ83 275 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 NRIP2Q9BQI9 281 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 RNF126Q9BV68 326 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 MFFQ9GZY8 342 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PARP12Q9H0J9 701 aaKnown RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 METTL8Q9H825 291 aaKnown RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PKD1L2Q7Z442 2459 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 SLC33A1O00400 549 aaPredicted RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PRRG2O14669 202 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 TNFSF12O43508 249 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PPYP01298 95 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 HLA-GP17693 338 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF718Q3SXZ3 478 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 TIMM23BQ5SRD1 257 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 FAM201AQ5SY85 155 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PCSK4Q6UW60 755 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 WDR82Q6UXN9 313 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 RELL2Q8NC24 303 aaPredicted RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 SECTM1Q8WVN6 248 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 RTN4IP1Q8WWV3 396 aaPredicted RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 KIRREL1Q96J84 757 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 CITED4Q96RK1 184 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 PKIBQ9C010 78 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 SLC2A9Q9NRM0 540 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 OR1A1Q9P1Q5 309 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 MBD2Q9UBB5 411 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 C14orf166Q9Y224 244 aaKnown RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 HRNRQ86YZ3 2850 aaPredicted RBP6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 CFAP46Q8IYW2 2715 aa6.25□□□□□ -1.41
SRFBP1-201ENST00000339397 MAP1AP78559 2803 aaPredicted RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 hCG_1807616A0A1W2PRN6 198 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 RNF222A6NCQ9 220 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 CRYM-AS1A6NIL9 109 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 ZSCAN5BA6NJL1 495 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 HMSDA8MTL9 139 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 C1QTNF9BB2RNN3 333 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 SPDEFO95238 335 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 PTBP3O95758 552 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 C1QTNF9P0C862 333 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 GCH1P30793 250 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 S100A11P31949 105 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 MPV17LQ2QL34 196 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 PAN3Q58A45 887 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 C11orf87Q6NUJ2 197 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 ZNF818PQ6ZRF7 136 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 LYZL2Q7Z4W2 148 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 BOLLQ8N9W6 283 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 LHFPL5Q8TAF8 219 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 MRPL24Q96A35 216 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 TP53RKQ96S44 253 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 BCL2L14Q9BZR8 327 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 ESRP2Q9H6T0 727 aaKnown RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 OR5AC2Q9NZP5 309 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 USF3Q68DE3 2245 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 MSGN1A6NI15 193 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 J3QW42 95 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 IFNA2P01563 188 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 CRHP06850 196 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 CTSDP07339 412 aaPredicted RBP6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 KITLGP21583 273 aa6.24□□□□□ -1.41
SRFBP1-201ENST00000339397 TAS2R31P59538 309 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms