RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KLF3P57682 345 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 KLRB1Q12918 225 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 HERPUD1Q15011 391 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 C3orf36Q3SXR2 165 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 SPRNQ5BIV9 151 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 POC1AQ8NBT0 407 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 RHOFQ9HBH0 211 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 DECR2Q9NUI1 292 aa18.96■□□□□ 0.63
PDLIM2-203ENST00000339162 PLCE1Q9P212 2302 aa18.96■□□□□ 0.62
PDLIM2-203ENST00000339162 FXYD6-FXYD2A0A087WZ82 144 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 C13orf42A0A1B0GVH6 325 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 PLSCR5A0PG75 271 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 GLP1RP43220 463 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 RBM39Q14498 530 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 ATXN7L3Q14CW9 347 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 ZNF146Q15072 292 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 PLPPR1Q8TBJ4 325 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 GON7Q9BXV9 100 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 CLEC4MQ9H2X3 399 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 IFT22Q9H7X7 185 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 KALRNO60229 2985 aa18.95■□□□□ 0.62
PDLIM2-203ENST00000339162 ADAP1O75689 374 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 IGHV3-13P01766 116 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 CXCL2P19875 107 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 ELMOD3Q96FG2 381 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 C1orf123Q9NWV4 160 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 POLEQ07864 2286 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 DBX1A6NMT0 343 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 ARPC5O15511 151 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 THBDP07204 575 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 CTSDP07339 412 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 PIGPP57054 158 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 PHLDA2Q53GA4 152 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 SPERTQ8NA61 448 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 DMRTA2Q96SC8 542 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 MRPL37Q9BZE1 423 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 TLNRD1Q9H1K6 362 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 HES4Q9HCC6 221 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 ATP23Q9Y6H3 246 aa18.94■□□□□ 0.62
PDLIM2-203ENST00000339162 IGKV1-6A0A0C4DH72 117 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 TRDCB7Z8K6 153 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 SH2D1BO14796 132 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 SPRY3O43610 288 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 HAND1O96004 215 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 SERPINF1P36955 418 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 ECI1P42126 302 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 SNTB1Q13884 538 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 ZCCHC14Q8WYQ9 949 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 VKORC1Q9BQB6 163 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 CHD3Q12873 2000 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 TRAV14DV4A0A0A6YYC5 116 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 TEX13DA0A0J9YY54 714 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 C5orf51A6NDU8 294 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 MPTX1A8MV57 137 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 UNQ6494/PRO21346Q6UXR6 183 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 Q6ZS49 121 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 OR11L1Q8NGX0 322 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 MEMO1Q9Y316 297 aa18.93■□□□□ 0.62
PDLIM2-203ENST00000339162 PSPNO60542 156 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 PTBP3O95758 552 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 PPYP01298 95 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 HLA-GP17693 338 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 UBALD1Q8TB05 177 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 MOB3AQ96BX8 217 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 TAAR3PQ9P1P4 343 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 ITPR1Q14643 2758 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 A0A1B0GWJ7 208 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 DPRXA6NFQ7 191 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 ABCD4O14678 606 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 RGS11O94810 467 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 HERV-K104P61576 105 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 ABCA11PQ4W5N1 156 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 SPIN3Q5JUX0 258 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 LPCAT3Q6P1A2 487 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 TMEM108Q6UXF1 575 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 ACP7Q6ZNF0 438 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 PRR18Q8N4B5 295 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 LRRC29Q8WV35 223 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 OR2V2Q96R30 315 aa18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 RIMS4Q9H426 269 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-203ENST00000339162 ROS1P08922 2347 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 KIR2DS1A0A191URI9 304 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 KIR2DS4P43632 304 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 LY6DQ14210 128 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 KIR2DS1Q14954 304 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 SRSF7Q16629 238 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 SP6Q3SY56 376 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 SGPP2Q8IWX5 399 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 COQ8AQ8NI60 647 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 PPP1R1CQ8WVI7 109 aa18.91■□□□□ 0.62
PDLIM2-203ENST00000339162 IGLV3-9A0A075B6K5 115 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 IFNA2P01563 188 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 TK1P04183 234 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 GLAP06280 429 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 ACAA1P09110 424 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 BOLLQ8N9W6 283 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 IL1F10Q8WWZ1 152 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 HEXA-AS1Q9H8Q6 139 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 CRYM-AS1A6NIL9 109 aa18.9■□□□□ 0.62
PDLIM2-203ENST00000339162 CD8AP01732 235 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms