RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FABP6P51161 128 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 TMEM241Q24JQ0 296 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 ZDHHC23Q8IYP9 409 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 KLHDC1Q8N7A1 406 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 OR2T10Q8NGZ9 312 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 OR5R1Q8NH85 324 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 ZPLD1Q8TCW7 415 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 NTNG2Q96CW9 530 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 A0A1B0GTI1 187 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 FCGR3AP08637 254 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 ACAA2P42765 397 aaKnown RBP14.15□□□□□ -0.14
NPHP3-201ENST00000337331 PNRC1Q12796 327 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-201ENST00000337331 WIPI1Q5MNZ9 446 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-201ENST00000337331 UNQ9370/PRO34162Q6UXP9 181 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 DEFB108BQ8NET1 73 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 RNF126Q9BV68 326 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 SH3BGRL3Q9H299 93 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 CNTD2Q9H8S5 307 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 E9PQ18 207 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 H0YIZ8 118 aa14.15□□□□□ -0.14
NPHP3-201ENST00000337331 RPS11P62280 158 aaKnown RBP eCLIP14.15□□□□□ -0.14
NPHP3-201ENST00000337331 H1FXQ92522 213 aaKnown RBP14.15□□□□□ -0.14
NPHP3-201ENST00000337331 A8MWP6 167 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 SH2D1BO14796 132 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 HPRT1P00492 218 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 APOA2P02652 100 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 PMCHP20382 165 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 FUT3P21217 361 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 ZNF321PQ8N8H1 164 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 KCNE4Q8WWG9 221 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 SPSB1Q96BD6 273 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 GABRG3Q99928 467 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 KLF13Q9Y2Y9 288 aaPredicted RBP14.14□□□□□ -0.15
NPHP3-201ENST00000337331 B4DEV8 164 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 ARR3P36575 388 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 HINT1P49773 126 aaPredicted RBP14.14□□□□□ -0.15
NPHP3-201ENST00000337331 BSXQ3C1V8 233 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 ZNF738Q8NE65 137 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 OR2V1Q8NHB1 315 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 RNF150Q9ULK6 438 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 CYR61O00622 381 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 PLPP3O14495 311 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 FUT6P51993 359 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 FZD5Q13467 585 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 GUSBP11Q6P575 273 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 RBMXL3Q8N7X1 1067 aaKnown RBP14.14□□□□□ -0.15
NPHP3-201ENST00000337331 OR1F12Q8NHA8 337 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 UBALD1Q8TB05 177 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 SCN2AQ99250 2005 aa14.14□□□□□ -0.15
NPHP3-201ENST00000337331 C4orf47A7E2U8 309 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 F8VVB4 439 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 F8VWA3 439 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 GAPDHP04406 335 aaKnown RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 GLIPR1P48060 266 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 DSCR4P56555 118 aaPredicted RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 ATP6V1FQ16864 119 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 OR10P1Q8NGE3 313 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 TOX4O94842 621 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 C6orf201Q7Z4U5 140 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 ATG4DQ86TL0 474 aaPredicted RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 GCNT2Q8N0V5 402 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 SNHG12Q9BXW3 62 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 KCNIP2Q9NS61 270 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 YBX2Q9Y2T7 364 aaKnown RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 LOXL2Q9Y4K0 774 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 MRPS18BQ9Y676 258 aaKnown RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 K7EQS6 105 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 P2RY1P47900 373 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 ZNF90Q03938 601 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 TSPO2Q5TGU0 170 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 CATSPERDQ86XM0 798 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 A0A087WV48 116 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 MGST1P10620 155 aaKnown RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 FGF5P12034 268 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 ATP6V0CP27449 155 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 PRSS12P56730 875 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 FUT5Q11128 374 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 HLA-BQ31612 363 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 FAM78BQ5VT40 261 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 OR2C3Q8N628 320 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 TMEM52Q8NDY8 209 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 CPEB3Q8NE35 698 aaKnown RBP14.13□□□□□ -0.15
NPHP3-201ENST00000337331 PCGF1Q9BSM1 259 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 PRSS50Q9UI38 385 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 KLHDC2Q9Y2U9 406 aa14.13□□□□□ -0.15
NPHP3-201ENST00000337331 MAP1LC3B2A6NCE7 125 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 ZNF205O95201 554 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 FAM157CP0CG43 387 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 ELOBQ15370 118 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 ANKRD55Q3KP44 614 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 SPATA46Q5T0L3 261 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 PRR27Q6MZM9 219 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 BEND2Q8NDZ0 799 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 MAP1LC3BQ9GZQ8 125 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 NGBQ9NPG2 151 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 RGPD3A6NKT7 1758 aaPredicted RBP14.12□□□□□ -0.15
NPHP3-201ENST00000337331 RGPD4Q7Z3J3 1758 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 MYOFQ9NZM1 2061 aa14.12□□□□□ -0.15
NPHP3-201ENST00000337331 DANCRP0C864 163 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms