RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 OR14L1PQ8NHC6 308 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 PFDN5Q99471 154 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 SYT3Q9BQG1 590 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 ZNF286AQ9HBT8 521 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 hCG_38984A0A1B0GV85 526 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 PROB1E7EW31 1015 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 ZNHIT1O43257 154 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 CDX1P47902 265 aaPredicted RBP17.15■□□□□ 0.34
CDCA4-201ENST00000336219 PMS2CLQ68D20 193 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 AAED1Q7RTV5 226 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 ZNF100Q8IYN0 542 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 OR5C1Q8NGR4 320 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 IL36GQ9NZH8 169 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 ZNF391Q9UJN7 358 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 TMED3Q9Y3Q3 217 aa17.15■□□□□ 0.34
CDCA4-201ENST00000336219 A0A1B0GW64 132 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 NKX2-1P43699 371 aaPredicted RBP17.14■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF92Q03936 586 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF429Q86V71 674 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 KCNE4Q8WWG9 221 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 FOXB1Q99853 325 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 PARPBPQ9NWS1 579 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 DMRT1Q9Y5R6 373 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 MPPED1O15442 326 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 TMEM50AO95807 157 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 PPYP01298 95 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 DYNLT3P51808 116 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 FUT6P51993 359 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 ICAM4Q14773 271 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 FGFBP3Q8TAT2 258 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 SGCZQ96LD1 299 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 WNT5BQ9H1J7 359 aa17.14■□□□□ 0.33
CDCA4-201ENST00000336219 TRDCB7Z8K6 153 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 SPIN3Q5JUX0 258 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 TMEM252Q8N6L7 170 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 OR2H1Q9GZK4 316 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF442Q9H7R0 627 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 ADAM20O43506 726 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 CXCL13O43927 109 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 SLC34A2O95436 690 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 JMJD7P0C870 316 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 GNRHRP30968 328 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 CEACAM16Q2WEN9 425 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 TBC1D26Q86UD7 250 aa17.13■□□□□ 0.33
CDCA4-201ENST00000336219 VPS13AQ96RL7 3174 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 NTN3O00634 580 aaPredicted RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 PDCD6O75340 191 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 PITX3O75364 302 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 P04436 131 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 TCN2P20062 427 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 FOLR3P41439 243 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 UCP3P55916 312 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF266Q14584 549 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 DAZAP2Q15038 168 aaPredicted RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF610Q8N9Z0 462 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 OR10D4PQ8NGN7 298 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 RHOVQ96L33 236 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 SLC7A10Q9NS82 523 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 UBE2J1Q9Y385 318 aaPredicted RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 FRYLO94915 3013 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 CYB5BO43169 146 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BKO60814 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 OR7C1O76099 320 aaPredicted RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 SCAF4O95104 1147 aaKnown RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BJP06899 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BOP23527 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BBP33778 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 NPBWR2P48146 333 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BDP58876 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BCP62807 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 ZFP36L1Q07352 338 aaKnown RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 MALLQ13021 153 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 OR8B8Q15620 311 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST2H2BEQ16778 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.12■□□□□ 0.33
CDCA4-201ENST00000336219 PLCXD3Q63HM9 321 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 ABLIM2Q6H8Q1 611 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF695Q8IW36 515 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 CCDC71LQ8N9Z2 235 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BHQ93079 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BNQ99877 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 HIST1H2BMQ99879 126 aa17.12■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF729A6NN14 1252 aaPredicted RBP17.11■□□□□ 0.33
CDCA4-201ENST00000336219 TRGC2P03986 189 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 CFIP05156 583 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 RFPL3SP0C7P2 107 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 S100A2P29034 98 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 HAAOP46952 286 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 ZNF154Q13106 437 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 TRA2AQ13595 282 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDCA4-201ENST00000336219 CALHM1Q8IU99 346 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 PIGCQ92535 297 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 ADGRG7Q96K78 797 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 TMEM222Q9H0R3 208 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 GAR1Q9NY12 217 aaKnown RBP17.11■□□□□ 0.33
CDCA4-201ENST00000336219 SOD3P08294 240 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 RBM11P57052 281 aaKnown RBP17.11■□□□□ 0.33
CDCA4-201ENST00000336219 RIPPLY2Q5TAB7 128 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 OR10D3Q8NH80 312 aa17.11■□□□□ 0.33
CDCA4-201ENST00000336219 HLA-CQ95604 372 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms