RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
CMC1-201ENST00000334841 ZNF260Q3ZCT1 412 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 TMEM69Q5SWH9 247 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
CMC1-201ENST00000334841 GDPD3Q7L5L3 318 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 CIARTQ8N365 385 aaPredicted RBP12.53□□□□□ -0.4
CMC1-201ENST00000334841 TPRX1Q8N7U7 411 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■■■■■ 37.3
CMC1-201ENST00000334841 DIABLOQ9NR28 239 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 ING3Q9NXR8 418 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 ETAA1Q9NY74 926 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 AK3Q9UIJ7 227 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 AKAP9Q99996 3911 aa12.53□□□□□ -0.4
CMC1-201ENST00000334841 TMEM235A6NFC5 223 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 C22orf46C9J442 243 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 H7C1Q1 480 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.41
CMC1-201ENST00000334841 PTHLHP12272 177 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 ZFP36P26651 326 aaKnown RBP12.52□□□□□ -0.41
CMC1-201ENST00000334841 GLIPR1P48060 266 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 KCNJ3P48549 501 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 P2RX3P56373 397 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 CDNFQ49AH0 187 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 Q6ZPA2 131 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 TCF23Q7RTU1 214 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 GAPTQ8N292 157 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 OR5D13Q8NGL4 314 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 H1FXQ92522 213 aaKnown RBP12.52□□□□□ -0.41
CMC1-201ENST00000334841 C1orf159Q96HA4 380 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 HDHD3Q9BSH5 251 aaPredicted RBP12.52□□□□□ -0.41
CMC1-201ENST00000334841 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 C19orf12Q9NSK7 152 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 KIF25Q9UIL4 384 aa12.52□□□□□ -0.41
CMC1-201ENST00000334841 GPR37O15354 613 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 HEXAP06865 529 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 ERP29P30040 261 aaKnown RBP12.51□□□□□ -0.41
CMC1-201ENST00000334841 S100A5P33763 92 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 TALDO1P37837 337 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 EDDM3BP56851 147 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 LCN2P80188 198 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 BTN2A1Q7KYR7 527 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 GCDHQ92947 438 aaPredicted RBP12.51□□□□□ -0.41
CMC1-201ENST00000334841 DCTN5Q9BTE1 182 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 V9GYH0 126 aa12.51□□□□□ -0.41
CMC1-201ENST00000334841 SETXQ7Z333 2677 aaKnown RBP12.51□□□□□ -0.41
CMC1-201ENST00000334841 TMEM30CPA0ZSE6 113 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 ODAMA1E959 279 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 MEX3AA1L020 520 aaKnown RBP12.5□□□□□ -0.41
CMC1-201ENST00000334841 SERPINE3A8MV23 424 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 NAPSAO96009 420 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 MNDAP41218 407 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 PAX2Q02962 417 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 ARL6IP1Q15041 203 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 TMEM249Q2WGJ8 235 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 SLC35E4Q6ICL7 350 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 MRPL30Q8TCC3 161 aaKnown RBP12.5□□□□□ -0.41
CMC1-201ENST00000334841 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 DACT3Q96B18 629 aaPredicted RBP12.5□□□□□ -0.41
CMC1-201ENST00000334841 LPAR2Q9HBW0 351 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 C12orf4Q9NQ89 552 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
CMC1-201ENST00000334841 CR1P17927 2039 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 ABCA2Q9BZC7 2435 aa12.5□□□□□ -0.41
CMC1-201ENST00000334841 CCDC168Q8NDH2 2452 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 MEIKINA0A087WXM9 373 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 TRBV23-1A0A0A0MS06 115 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 A0A0G2JMP0 313 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 A0A0X1KG70 313 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 SSX5O60225 188 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 CA11O75493 328 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 FOXH1O75593 365 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 MT-ND4P03905 459 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 MELTFP08582 738 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 IGHV4-31P0DP07 118 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 RPL31P62899 125 aaKnown RBP12.49□□□□□ -0.41
CMC1-201ENST00000334841 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 ZNF273Q14593 569 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 PNLIPRP3Q17RR3 467 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 OR4M2Q8NGB6 313 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 C8orf46Q8TAG6 207 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 COX4I2Q96KJ9 171 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
CMC1-201ENST00000334841 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
CMC1-201ENST00000334841 MRPS7Q9Y2R9 242 aaKnown RBP12.49□□□□□ -0.41
CMC1-201ENST00000334841 POLR3KQ9Y2Y1 108 aaPredicted RBP12.49□□□□□ -0.41
CMC1-201ENST00000334841 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
CMC1-201ENST00000334841 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
CMC1-201ENST00000334841 TRAV39A0A0B4J263 110 aa12.48□□□□□ -0.41
CMC1-201ENST00000334841 MEIOCA2RUB1 952 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms