RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 KITP10721 976 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CD79AP11912 226 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 LBPP18428 481 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CBLP22681 906 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RPL13AP40429 203 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RASSF2P50749 326 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RPL14P50914 215 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CAPZA1P52907 286 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MAXP61244 160 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SRSF4Q08170 494 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 PDIA2Q13087 525 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CBX3Q13185 183 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CHIT1Q13231 466 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DGCR6Q14129 220 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MAPK11Q15759 364 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TBCEQ15813 527 aaPredicted RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RNF151Q2KHN1 245 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 FAM229BQ4G0N7 80 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DEFB134Q4QY38 66 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SMUG1Q53HV7 270 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TOR2AQ5JU69 321 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ENTPD8Q5MY95 495 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 FAM53AQ6NSI3 398 aaPredicted RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NOXRED1Q6NXP6 359 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 FAM122CQ6P4D5 195 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ULK3Q6PHR2 472 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4L9Q6RFH8 374 aaPredicted RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 REG3GQ6UW15 175 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 PRSS58Q8IYP2 241 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MFSD4AQ8N468 514 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 FTMTQ8N4E7 242 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MS4A15Q8N5U1 240 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SNX31Q8N9S9 440 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 Q8N9W7 124 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ZBTB34Q8NCN2 500 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR5T2Q8NGG2 359 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR6K2Q8NGY2 324 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RP9Q8TA86 221 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ANKRD49Q8WVL7 239 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 HDAC2Q92769 488 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RFT1Q96AA3 541 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CPNE2Q96FN4 548 aaPredicted RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CARD19Q96LW7 228 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 PRAP1Q96NZ9 151 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ASPNQ9BXN1 380 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MRPS26Q9BYN8 205 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NMNAT2Q9BZQ4 307 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR51I2Q9H344 312 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 VSIRQ9H7M9 311 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 VCX3AQ9NNX9 186 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 PAPOLBQ9NRJ5 636 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 PLAC8Q9NZF1 115 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DUX4Q9UBX2 424 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TMCC3Q9ULS5 477 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RAB26Q9ULW5 256 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 POLDIP2Q9Y2S7 368 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 UFC1Q9Y3C8 167 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SNX13Q9Y5W8 968 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 U3KQE9 123 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NACAE9PAV3 2078 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DSPP15924 2871 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TRAV8-7A0A075B6U6 113 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TRAV34A0A0B4J273 112 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 IRGMA1A4Y4 181 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 AQP12BA6NM10 295 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 BUB1B-PAK6H3BSN5 160 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 EBAG9O00559 213 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR1I1O60431 355 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 LGI1O95970 557 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ACSM4P0C7M7 580 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NQO1P15559 274 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CCL3L1P16619 93 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SDC1P18827 310 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MSR1P21757 451 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 STOMP27105 288 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 GABARAPL2P60520 117 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CD300CQ08708 224 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TSPAN31Q12999 210 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 RCN1Q15293 331 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DEFB114Q30KQ6 69 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CNPY1Q3B7I2 92 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 HSP90AA5PQ58FG0 334 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 MRPL2Q5T653 305 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TRPT1Q86TN4 253 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 AQP12AQ8IXF9 295 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TCTE3Q8IZS6 198 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CCDC63Q8NA47 563 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 HIPK4Q8NE63 616 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR4F6Q8NGB9 312 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR5T3Q8NGG3 340 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR51L1Q8NGJ5 315 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR51T1Q8NGJ9 327 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR9Q1Q8NGQ5 310 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR6N1Q8NGY5 312 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SUN5Q8TC36 379 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TCP10LQ8TDR4 215 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 C1orf54Q8WWF1 131 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DEDD2Q8WXF8 326 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 OR5P3Q8WZ94 311 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 SLC7A6Q92536 515 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms