RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 BTNL3Q6UXE8 466 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 BPIFB2Q8N4F0 458 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 KIR3DL3Q8N743 410 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 TPRX1Q8N7U7 411 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 OR4M1Q8NGD0 313 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 OR5H6Q8NGV6 325 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
LRRC28-202ENST00000331450 SLC25A38Q96DW6 304 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 SIRPDQ9H106 197 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 NCOR1P1Q9H4R4 102 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 YAE1D1Q9NRH1 226 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 LPAR3Q9UBY5 353 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 SPATA2Q9UM82 520 aa13.22□□□□□ -0.29
LRRC28-202ENST00000331450 H3BUI4 141 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 SOCS1O15524 211 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 NOL3O60936 208 aaKnown RBP13.21□□□□□ -0.29
LRRC28-202ENST00000331450 AVPP01185 164 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 GLIPR1P48060 266 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 VEGFCP49767 419 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 TMEM50BP56557 158 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 MEF2CQ06413 473 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-202ENST00000331450 AESQ08117 197 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 ZNF273Q14593 569 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 TMEM200BQ69YZ2 307 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-202ENST00000331450 RTN4RL2Q86UN3 420 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 GAPTQ8N292 157 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 OR56B1Q8NGI3 324 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 HSF4Q9ULV5 492 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 LINC00312Q9Y6C7 94 aa13.21□□□□□ -0.29
LRRC28-202ENST00000331450 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 ODAMA1E959 279 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 FUOMA2VDF0 154 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 MCRIP1C9JLW8 97 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-202ENST00000331450 RAB27BO00194 218 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 MMP9P14780 707 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 BLVRBP30043 206 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-202ENST00000331450 DLX6P56179 175 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 DYNC1I2Q13409 638 aaKnown RBP13.2□□□□□ -0.3
LRRC28-202ENST00000331450 RBM39Q14498 530 aaKnown RBP13.2□□□□□ -0.3
LRRC28-202ENST00000331450 FAM189A2Q15884 450 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 CR1LQ2VPA4 569 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 MOGAT2Q3SYC2 334 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 Q71RC1 249 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-202ENST00000331450 C6orf201Q7Z4U5 140 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 Q8N7P7 452 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 SULT4A1Q9BR01 284 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 KIF25Q9UIL4 384 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 KPTNQ9Y664 436 aa13.2□□□□□ -0.3
LRRC28-202ENST00000331450 SMIM31A0A1B0GVY4 71 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 hADV38S2A0JD32 116 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 CCL3L1P16619 93 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 RORCP51449 518 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 PLAC9Q5JTB6 97 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 FAHD2BQ6P2I3 314 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-202ENST00000331450 C11orf42Q8N5U0 333 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 CORO2AQ92828 525 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 FAHD2AQ96GK7 314 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 WDFY2Q96P53 400 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 NEDD4LQ96PU5 975 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 RSL24D1Q9UHA3 163 aaKnown RBP13.19□□□□□ -0.3
LRRC28-202ENST00000331450 AUP1Q9Y679 476 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 WNK2Q9Y3S1 2297 aa13.19□□□□□ -0.3
LRRC28-202ENST00000331450 CSPG4Q6UVK1 2322 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 TMEM30CPA0ZSE6 113 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 M0R1W7 72 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 CA11O75493 328 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 FSHBP01225 129 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 CGB3P0DN86 165 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 CGB7P0DN87 165 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 ZNF182P17025 639 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-202ENST00000331450 ARF6P62330 175 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 NKAPLQ5M9Q1 402 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 FAM120AOSQ5T036 256 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 C1orf122Q6ZSJ8 110 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 OR10R2Q8NGX6 335 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 ACOT12Q8WYK0 555 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 DYRK2Q92630 601 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 UPRTQ96BW1 309 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 TBX15Q96SF7 602 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 FAAP24Q9BTP7 215 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 PECRQ9BY49 303 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 ABCG5Q9H222 651 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
LRRC28-202ENST00000331450 CCDC59Q9P031 241 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms