RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 MMP24Q9Y5R2 645 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 XKRY2A2RUG3 117 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 KCNAB3O43448 404 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 TMEM183BQ1AE95 376 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ZNF66Q6ZN08 573 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ADAT3Q96EY9 351 aaPredicted RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 OR2J1Q9GZK6 312 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 TRAPPC1Q9Y5R8 145 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 C17orf51A8MQB3 221 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ZNF207O43670 478 aaKnown RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 REG1BP48304 166 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 POLR2GP62487 172 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD3-201ENST00000330494 PLPPR5Q32ZL2 321 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 C8orf82Q6P1X6 216 aaPredicted RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 WDR31Q8NA23 367 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ADAD2Q8NCV1 583 aaKnown RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 HSD17B10Q99714 261 aaKnown RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 TRPM7Q96QT4 1865 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ARHGEF17Q96PE2 2063 aaPredicted RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 LEUTXA8MZ59 168 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 SCGB1C2P0DMR2 95 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 RPL24P83731 157 aaKnown RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 NSUN5P2Q63ZY6 315 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ZDHHC22Q8N966 263 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ASB5Q8WWX0 329 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 PIK3IP1Q96FE7 263 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 NAA60Q9H7X0 242 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 SLC2A8Q9NY64 477 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 IGHV3-21A0A0B4J1V1 117 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 HRASP01112 189 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 SSBP1Q04837 148 aaKnown RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 ZNF770Q6IQ21 691 aaPredicted RBP8.93□□□□□ -0.98
CHD3-201ENST00000330494 TMEM38BQ9NVV0 291 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 A0A0J9YW62 118 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 DEGS2Q6QHC5 323 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 SEZ6L2Q6UXD5 910 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 TPRX1Q8N7U7 411 aa8.93□□□□□ -0.98
CHD3-201ENST00000330494 hADV38S2A0JD32 116 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 DYNLT3P51808 116 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 PRRX1P54821 245 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 TGIF2LXQ8IUE1 241 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 OR5D13Q8NGL4 314 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 AMDHD2Q9Y303 409 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 ASXL3Q9C0F0 2248 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 SNRNP200O75643 2136 aaKnown RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 TRBV5-3A0A0A0MS03 114 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 WISP3O95389 354 aaPredicted RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 IGHA1P01876 353 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 EFNB2P52799 333 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 FAM209BQ5JX69 171 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 OR1B1Q8NGR6 318 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 ADAMTS17Q8TE56 1095 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 PRRX2Q99811 253 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 GAL3ST2Q9H3Q3 398 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 LYRM2Q9NU23 88 aaPredicted RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 ST8SIA5O15466 376 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 OGG1O15527 345 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 RPLP1P05386 114 aaKnown RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 C19orf48Q6RUI8 117 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 UQCC3Q6UW78 93 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 ETV3LQ6ZN32 361 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 OR1L4Q8NGR5 311 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 IL22RA2Q969J5 263 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 PRSS50Q9UI38 385 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 PILRBQ9UKJ0 227 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 ICE1Q9Y2F5 2266 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 GYPAP02724 150 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 SP9P0CG40 484 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 LYZP61626 148 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 FNDC7Q5VTL7 733 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 RASL12Q9NYN1 266 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 GREB1LQ9C091 1923 aaPredicted RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 HIST1H3AP68431 136 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 ZNF429Q86V71 674 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 CMTM3Q96MX0 182 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 SPP1P10451 314 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 IGFBP7Q16270 282 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 UQCC1Q9NVA1 299 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 COA4Q9NYJ1 87 aa8.92□□□□□ -0.98
CHD3-201ENST00000330494 NYNRINQ9P2P1 1898 aaKnown RBP8.92□□□□□ -0.98
CHD3-201ENST00000330494 TRAV38-1A0A0B4J264 116 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 ANKRD20A5PA0PJZ0 165 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 CDCP2Q5VXM1 449 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 DOCK6Q96HP0 2047 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 TRDCB7Z8K6 153 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 K7ESF4 209 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 M0QZ24 198 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 GZMMP51124 257 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 OR1K1Q8NGR3 316 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 SLC17A5Q9NRA2 495 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 NPTNQ9Y639 398 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 OR5B21A6NL26 309 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 TIAF1O95411 115 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 MDH2P40926 338 aaKnown RBP8.91□□□□□ -0.98
CHD3-201ENST00000330494 CCL8P80075 99 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms