RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 C10orf91Q5T1B1 145 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 OR2T2Q6IF00 324 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TBC1D26Q86UD7 250 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 ZNF573Q86YE8 665 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 SUMF2Q8NBJ7 301 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TMEM178AQ8NBL3 297 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 UBAC2Q8NBM4 344 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 SECTM1Q8WVN6 248 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 TSNAXQ99598 290 aaKnown RBP12.44□□□□□ -0.42
TPM3-206ENST00000330188 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
TPM3-206ENST00000330188 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 ZFP57Q9NU63 452 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 ATP23Q9Y6H3 246 aa12.44□□□□□ -0.42
TPM3-206ENST00000330188 MED12LQ86YW9 2145 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 IGKV1D-13A0A0B4J2D9 117 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 KIR2DS1A0A191URI9 304 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 TRDCB7Z8K6 153 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 GPR137BO60478 399 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 IGKV1-13P0DP09 117 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 KIR2DS4P43632 304 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 SRPXP78539 464 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 IL24Q13007 206 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 KIR2DS1Q14954 304 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 ZNF818PQ6ZRF7 136 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 DMBX1Q8NFW5 382 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
TPM3-206ENST00000330188 ARV1Q9H2C2 271 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 TMEM231Q9H6L2 316 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 SPACA1Q9HBV2 294 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
TPM3-206ENST00000330188 TRAV24A0A0B4J272 114 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 ST8SIA3O43173 380 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 CA6P23280 308 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 P2RY1P47900 373 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 SOX8P57073 446 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 PMP22Q01453 160 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 IGFBP7Q16270 282 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 SPATA46Q5T0L3 261 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 GPR157Q5UAW9 335 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 PUSL1Q8N0Z8 303 aaKnown RBP12.43□□□□□ -0.42
TPM3-206ENST00000330188 GAPTQ8N292 157 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 GTF3AQ92664 365 aaKnown RBP12.43□□□□□ -0.42
TPM3-206ENST00000330188 TMEM56Q96MV1 263 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 PKIBQ9C010 78 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 OR51I2Q9H344 312 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 RHOFQ9HBH0 211 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 WFDC1Q9HC57 220 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 TREM1Q9NP99 234 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 TMEM56-RWDD3S4R434 201 aa12.43□□□□□ -0.42
TPM3-206ENST00000330188 TRBV6-6A0A0A6YYG2 114 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 NKX2-6A6NCS4 301 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 F8W036 122 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 IL32P24001 234 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 TNFSF10P50591 281 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 CAV2P51636 162 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 BLOC1S1P78537 153 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 GUCA2BQ16661 112 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 SPIN3Q5JUX0 258 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 C20orf204Q6ZNR8 217 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 VASH2Q86V25 355 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 MYPOPQ86VE0 399 aaPredicted RBP12.42□□□□□ -0.42
TPM3-206ENST00000330188 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 SVBPQ8N300 66 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 C17orf78Q8N4C9 275 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 RIMS4Q9H426 269 aaPredicted RBP12.42□□□□□ -0.42
TPM3-206ENST00000330188 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 UQCC1Q9NVA1 299 aa12.42□□□□□ -0.42
TPM3-206ENST00000330188 CARHSP1Q9Y2V2 147 aaKnown RBP12.42□□□□□ -0.42
TPM3-206ENST00000330188 RHBDL1O75783 438 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 CDS2O95674 445 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 CTXN2P0C2S0 81 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 MUC1P15941 1255 aaPredicted RBP12.41□□□□□ -0.42
TPM3-206ENST00000330188 ZNF14P17017 642 aaPredicted RBP12.41□□□□□ -0.42
TPM3-206ENST00000330188 TBC1D28Q2M2D7 210 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 GMPPAQ96IJ6 420 aaPredicted RBP12.41□□□□□ -0.42
TPM3-206ENST00000330188 UBE2J1Q9Y385 318 aaPredicted RBP12.41□□□□□ -0.42
TPM3-206ENST00000330188 HS3ST1O14792 307 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 SLC34A2O95436 690 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 CELA3BP08861 270 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 ZNF169Q14929 603 aaPredicted RBP12.41□□□□□ -0.42
TPM3-206ENST00000330188 ZNF880Q6PDB4 577 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 PCSK4Q6UW60 755 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 P4HA3Q7Z4N8 544 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 SELENOHQ8IZQ5 122 aaKnown RBP12.41□□□□□ -0.42
TPM3-206ENST00000330188 RDH5Q92781 318 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 WNT2BQ93097 391 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 GPHA2Q96T91 129 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 TLNRD1Q9H1K6 362 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 CCL28Q9NRJ3 127 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 FAM96BQ9Y3D0 163 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
TPM3-206ENST00000330188 J3QT63 122 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms