RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PPA2Q9H2U2 334 aa15.82■□□□□ 0.12
EXOSC3-201ENST00000327304 CBLN4Q9NTU7 201 aa15.82■□□□□ 0.12
EXOSC3-201ENST00000327304 TMED4Q7Z7H5 227 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 DTX2Q86UW9 622 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 ZNF295-AS1Q8N0V1 137 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 OR52B4Q8NGK2 314 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 SCGB3A2Q96PL1 93 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 HDHD3Q9BSH5 251 aaPredicted RBP15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 ZNF436Q9C0F3 470 aaPredicted RBP15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 SPACA1Q9HBV2 294 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 UFSP2Q9NUQ7 469 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 ANXA10Q9UJ72 324 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 CRYBG3Q68DQ2 2970 aa15.81■□□□□ 0.12
EXOSC3-201ENST00000327304 FABP7O15540 132 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 RHBDL1O75783 438 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 PTBP3O95758 552 aaKnown RBP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 ACAA1P09110 424 aaPredicted RBP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 RBMXP38159 391 aaKnown RBP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 CCL8P80075 99 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 MZT1Q08AG7 82 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 ZNF826PQ6ZT77 177 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 C11orf53Q8IXP5 236 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 BATF2Q8N1L9 274 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 MUC20Q8N307 709 aaPredicted RBP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 CAPSLQ8WWF8 208 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 HYLS1Q96M11 299 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 DIRC2Q96SL1 478 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 TLNRD1Q9H1K6 362 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 RANBP3Q9H6Z4 567 aaPredicted RBP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 PLEKHF2Q9H8W4 249 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 C12orf4Q9NQ89 552 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 EHFQ9NZC4 300 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 MGAT4CQ9UBM8 478 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 LAMP3Q9UQV4 416 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 A6NLC8 198 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 CDIPTO14735 213 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 GLAP06280 429 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 CD55P08174 381 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 PRKACAP17612 351 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 TNFSF4P23510 183 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 ARPC4P59998 168 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 CHD3Q12873 2000 aaKnown RBP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 SRSF7Q16629 238 aaKnown RBP eCLIP15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 FAM58AQ8N1B3 248 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 MAFIPQ8WZ33 124 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 MS4A5Q9H3V2 200 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 IFT22Q9H7X7 185 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 IL19Q9UHD0 177 aa15.8■□□□□ 0.12
EXOSC3-201ENST00000327304 IGKV1D-8A0A087WSZ0 117 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 C3orf80F5H4A9 247 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 FPR2P25090 351 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 ECI1P42126 302 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 TAS2R31P59538 309 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 UBE2MP61081 183 aaKnown RBP15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 PDCD1Q15116 288 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 PEG10Q86TG7 708 aaKnown RBP15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 OR2AK2Q8NG84 335 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 ZNF488Q96MN9 340 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 DLL4Q9NR61 685 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 GPR132Q9UNW8 380 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 CENPEQ02224 2701 aa15.79■□□□□ 0.12
EXOSC3-201ENST00000327304 AKAP6Q13023 2319 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 PPOXP50336 477 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 ERVK11-1P61568 191 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 SURF2Q15527 256 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 FAM209AQ5JX71 171 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 BRICD5Q6PL45 260 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 MOGAT3Q86VF5 341 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 MARCH1Q8TCQ1 289 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 VRK1Q99986 396 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 FN3KRPQ9HA64 309 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 ZNF286AQ9HBT8 521 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 C1orf123Q9NWV4 160 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 OR2A4O95047 310 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 GIPP09681 153 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 ZBTB25P24278 435 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 DHRS2Q13268 280 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 IKZF1Q13422 519 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 AADACL3Q5VUY0 350 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 WDR82Q6UXN9 313 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 Q6ZS49 121 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 C12orf45Q8N5I9 185 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 OR2A7Q96R45 310 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 NECAP2Q9NVZ3 263 aa15.78■□□□□ 0.12
EXOSC3-201ENST00000327304 MCRIP1C9JLW8 97 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 SDCBPO00560 298 aaPredicted RBP15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 NOS1APO75052 506 aaPredicted RBP15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 PGA5P0DJD9 388 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 GATA4P43694 442 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 HOXA4Q00056 320 aaPredicted RBP15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 NLRC3Q7RTR2 1065 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 LYG2Q86SG7 212 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 TMEM185AQ8NFB2 350 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 ASB13Q8WXK3 278 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 DYRK2Q92630 601 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 NRIP2Q9BQI9 281 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 GCM1Q9NP62 436 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 IL36RNQ9UBH0 155 aa15.77■□□□□ 0.11
EXOSC3-201ENST00000327304 SMLR1H3BR10 107 aa15.76■□□□□ 0.11
EXOSC3-201ENST00000327304 HLA-AP01891 365 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms