RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CALCRP30988 508 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 HTR2BP41595 481 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 GATA4P43694 442 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 PSG4Q00888 419 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 ARL6IP1Q15041 203 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 ZMYND11Q15326 602 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 BAK1Q16611 211 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 TSPO2Q5TGU0 170 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 MZT2BQ6NZ67 158 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 TMEM65Q6PI78 240 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 CRIP3Q6Q6R5 217 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 NOXA1Q86UR1 476 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 OR5AS1Q8N127 324 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 Q8N402 240 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 OR51A4Q8NGJ6 313 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 LGALS14Q8TCE9 139 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 CREB3L1Q96BA8 519 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 ST6GAL2Q96JF0 529 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 LYZL4Q96KX0 146 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 POFUT1Q9H488 388 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 SEBOXQ9HB31 216 aaPredicted RBP5.41□□□□□ -1.54
CSTF3-201ENST00000323959 COMMD3Q9UBI1 195 aa5.41□□□□□ -1.54
CSTF3-201ENST00000323959 NOP16Q9Y3C1 178 aaKnown RBP5.41□□□□□ -1.54
CSTF3-201ENST00000323959 IGHV3-15A0A0B4J1V0 119 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 hCG_38984A0A1B0GV85 526 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A10PA6NDY2 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A18PA6NE21 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A16PA6NEW6 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A20PA6NIJ5 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A8PA6NJQ4 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A7PA6NKC0 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A22PA8MWA6 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A12PA8MX19 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A5PA8MXJ8 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A23PA8MXZ1 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 RER1O15258 196 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 PLA2G10O15496 165 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 TBX1O43435 398 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A15PP0C7V4 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A13PP0C7W8 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A14PP0C7W9 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 FAM90A24PP0C7X0 464 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 CECR9P0C854 216 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 SLC2A2P11168 524 aaPredicted RBP5.4□□□□□ -1.54
CSTF3-201ENST00000323959 HLA-DMAP28067 261 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 SLC6A1P30531 599 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 CDAP32320 146 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 RFX2P48378 723 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 AP3S2P59780 193 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 RIPPLY1Q0D2K3 151 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 KLF9Q13886 244 aaPredicted RBP5.4□□□□□ -1.54
CSTF3-201ENST00000323959 CEACAM16Q2WEN9 425 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 NHLRC3Q5JS37 347 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 GDPD3Q7L5L3 318 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 SKA3Q8IX90 412 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 CMTM4Q8IZR5 234 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 SAMD12Q8N8I0 201 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 OR10Z1Q8NGY1 313 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 OR10AC1Q8NH08 325 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 RFT1Q96AA3 541 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 MARVELD1Q9BSK0 173 aa5.4□□□□□ -1.54
CSTF3-201ENST00000323959 AK6Q9Y3D8 172 aaKnown RBP5.4□□□□□ -1.54
CSTF3-201ENST00000323959 RGS5O15539 181 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 TBPP20226 339 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 ERP29P30040 261 aaKnown RBP5.4□□□□□ -1.55
CSTF3-201ENST00000323959 CBX5P45973 191 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 P2RY14Q15391 338 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 TAF13Q15543 124 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 SRSF7Q16629 238 aaKnown RBP eCLIP5.4□□□□□ -1.55
CSTF3-201ENST00000323959 PNLIPRP3Q17RR3 467 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 PLA1AQ53H76 456 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 LINC00469Q8N7U9 141 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 PXT1Q8NFP0 134 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 LRRC20Q8TCA0 184 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 FAM3DQ96BQ1 224 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 MRPS24Q96EL2 167 aaKnown RBP5.4□□□□□ -1.55
CSTF3-201ENST00000323959 POM121L2Q96KW2 1035 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 MRPL37Q9BZE1 423 aaKnown RBP5.4□□□□□ -1.55
CSTF3-201ENST00000323959 SEC61A2Q9H9S3 476 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 BRD7Q9NPI1 651 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 TAS2R4Q9NYW5 299 aa5.4□□□□□ -1.55
CSTF3-201ENST00000323959 TMEM272A0A1B0GTI8 110 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 A0A1W2PQ09 198 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 ANKRD20A5PA0PJZ0 165 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 GGT3PA6NGU5 568 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 SPNP16150 400 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 ZNF32P17041 273 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 CAV3P56539 151 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 GPR176Q14439 515 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 CNN3Q15417 329 aaKnown RBP5.39□□□□□ -1.55
CSTF3-201ENST00000323959 SGCAQ16586 387 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 GFOD2Q3B7J2 385 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 PXDC1Q5TGL8 231 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 CARD17Q5XLA6 110 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 CORO6Q6QEF8 472 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 C1orf122Q6ZSJ8 110 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 C8orf86Q6ZUL3 223 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 AQP3Q92482 292 aa5.39□□□□□ -1.55
CSTF3-201ENST00000323959 APOBEC3DQ96AK3 386 aaPredicted RBP5.39□□□□□ -1.55
CSTF3-201ENST00000323959 SGK3Q96BR1 496 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms