RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 SSX5O60225 188 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 RCC1P18754 421 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 PRSS3P35030 304 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 ETV6P41212 452 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 KCNJ8Q15842 424 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 BAK1Q16611 211 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 OR52W1Q6IF63 320 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 PYHIN1Q6K0P9 492 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 MUC20Q8N307 709 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 SDSLQ96GA7 329 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 COQ2Q96H96 371 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 SRRQ9GZT4 340 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 SPACA1Q9HBV2 294 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 BEX4Q9NWD9 120 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 KIF25Q9UIL4 384 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 K7N7A8 449 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 NDUFB3O43676 98 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 INHBBP09529 407 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 LMO1P25800 156 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 CLDND2Q8NHS1 167 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 Q96MF0 132 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 SDHCQ99643 169 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 ABCB10Q9NRK6 738 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 HSF4Q9ULV5 492 aa12.79□□□□□ -0.36
PDLIM5-202ENST00000318007 PRRC2AP48634 2157 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 A0A0A6YYH2 397 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 A6NJ64 397 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 GLP1RP43220 463 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 NR4A2P43354 598 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 PITPNAQ00169 270 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF45Q02386 682 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 RBM39Q14498 530 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 LRRC10Q5BKY1 277 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 SPICQ8N5J4 248 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 OR8B3Q8NGG8 313 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 SNX22Q96L94 193 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 OR8B2Q96RD0 313 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 SOSTQ9BQB4 213 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 IFT22Q9H7X7 185 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 C12orf4Q9NQ89 552 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 TRAPPC2LQ9UL33 140 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 SERPINE3A8MV23 424 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 TNFRSF13BO14836 293 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 GSTP1P09211 210 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 HLA-DMAP28067 261 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 ERVFRD-1P60508 538 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 GNB2P62879 340 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF846Q147U1 533 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 LTC4SQ16873 150 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 NLRC3Q7RTR2 1065 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 WFDC11Q8NEX6 87 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 FCAMRQ8WWV6 532 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 MED30Q96HR3 178 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 WDR12Q9GZL7 423 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
PDLIM5-202ENST00000318007 IGKV1D-8A0A087WSZ0 117 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 RNF223E7ERA6 249 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 CSN2P05814 226 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 PAX1P15863 534 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 OMGP23515 440 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 GIFP27352 417 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 LCN2P80188 198 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 PRB3Q04118 309 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 RSBN1Q5VWQ0 802 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 MRPL30Q8TCC3 161 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 THAP7Q9BT49 309 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 C19orf12Q9NSK7 152 aa12.77□□□□□ -0.37
PDLIM5-202ENST00000318007 LPLP06858 475 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 FCGR3AP08637 254 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 WNT2P09544 360 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 CSF3P09919 207 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 SSTR5P35346 364 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 FAM185AQ8N0U4 392 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 OR13A1Q8NGR1 328 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 PPP1R35Q8TAP8 253 aa12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 NEIL1Q96FI4 390 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 PATZ1Q9HBE1 687 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-202ENST00000318007 MIOXQ9UGB7 285 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms