RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 FOLR3P41439 243 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 LBHQ53QV2 105 aaPredicted RBP16.79■□□□□ 0.28
ZNF554-201ENST00000317243 FAM89BQ8N5H3 189 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 CYB561D1Q8N8Q1 229 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 ZFP62Q8NB50 900 aaPredicted RBP16.79■□□□□ 0.28
ZNF554-201ENST00000317243 LFNGQ8NES3 379 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 ALKBH3Q96Q83 286 aaPredicted RBP16.79■□□□□ 0.28
ZNF554-201ENST00000317243 CYTIPO60759 359 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 TMEM225BP0DP42 221 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 OPRM1P35372 400 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 MLF1P58340 268 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 FXYD4P59646 89 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 PPP1R32Q7Z5V6 425 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 ADPRHL1Q8NDY3 354 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 M1APQ8TC57 530 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 SLC25A31Q9H0C2 315 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 UNKLQ9H9P5 680 aaKnown RBP16.79■□□□□ 0.28
ZNF554-201ENST00000317243 PADI1Q9ULC6 663 aa16.79■□□□□ 0.28
ZNF554-201ENST00000317243 OR5H8P0DN80 308 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 PAX1P15863 534 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 MDKP21741 143 aaPredicted RBP16.78■□□□□ 0.28
ZNF554-201ENST00000317243 PIGPP57054 158 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 FAM189A2Q15884 450 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 C21orf62-AS1Q17RA5 79 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 WIPI1Q5MNZ9 446 aaPredicted RBP16.78■□□□□ 0.28
ZNF554-201ENST00000317243 DNLZQ5SXM8 178 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 C5orf24Q7Z6I8 188 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 ZNF664Q8N3J9 261 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 SH2D2AQ9NP31 389 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 NXT1Q9UKK6 140 aaKnown RBP16.78■□□□□ 0.28
ZNF554-201ENST00000317243 KCNIP3Q9Y2W7 256 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 GPR137BO60478 399 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 SRP19P09132 144 aaKnown RBP16.78■□□□□ 0.28
ZNF554-201ENST00000317243 PGA5P0DJD9 388 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 DSCR4P56555 118 aaPredicted RBP16.78■□□□□ 0.28
ZNF554-201ENST00000317243 CD81P60033 236 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 NUTF2P61970 127 aaKnown RBP16.78■□□□□ 0.28
ZNF554-201ENST00000317243 TMEM123Q8N131 208 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 SHANK1Q9Y566 2161 aa16.78■□□□□ 0.28
ZNF554-201ENST00000317243 A0A087WWC5 75 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 MKRN2OSH3BPM6 223 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 TRAPPC6AO75865 159 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 MSR1P21757 451 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 HOXA6P31267 233 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 EXT1Q16394 746 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 LIME1Q9H400 295 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 PLEK2Q9NYT0 353 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 EREGO14944 169 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 APLNRP35414 380 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 FOXO1Q12778 655 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 PHLDA2Q53GA4 152 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 BRICD5Q6PL45 260 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 LYZL2Q7Z4W2 148 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 BATF2Q8N1L9 274 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 OR14L1PQ8NHC6 308 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 FGFBP3Q8TAT2 258 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 FAM210BQ96KR6 192 aa16.77■□□□□ 0.28
ZNF554-201ENST00000317243 FOXD3Q9UJU5 478 aaPredicted RBP16.77■□□□□ 0.28
ZNF554-201ENST00000317243 A0A1B0GW64 132 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 ZNF850A8MQ14 1090 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 SERPINE3A8MV23 424 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 GLIPR1P48060 266 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 CLDN15P56746 228 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 ZXDAP98168 799 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 SPSB3Q6PJ21 355 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 ZNF845Q96IR2 970 aaPredicted RBP16.76■□□□□ 0.27
ZNF554-201ENST00000317243 FAAP24Q9BTP7 215 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 HES7Q9BYE0 225 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 CCDC187A0A096LP49 1063 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 FAM221AA4D161 298 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 CRYM-AS1A6NIL9 109 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 GEMIN2O14893 280 aaKnown RBP16.76■□□□□ 0.27
ZNF554-201ENST00000317243 DHHO43323 396 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 ANGPTL7O43827 346 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 CXCL13O43927 109 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 OR5AC1P0C628 307 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 GZMBP10144 247 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 B3GALT5-AS1P59052 145 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 SPINK14Q6IE38 97 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 C20orf196Q8IYI0 205 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 OR52M1Q8NGK5 317 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 OR2G3Q8NGZ4 309 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 OR5R1Q8NH85 324 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 TVP23CQ96ET8 276 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 NIPSNAP3BQ9BS92 247 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 ULBP2Q9BZM5 246 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 PIGLQ9Y2B2 252 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 EP300Q09472 2414 aaPredicted RBP16.76■□□□□ 0.27
ZNF554-201ENST00000317243 A0A1W2PNU3 283 aaPredicted RBP16.76■□□□□ 0.27
ZNF554-201ENST00000317243 FOXI3A8MTJ6 420 aaPredicted RBP16.76■□□□□ 0.27
ZNF554-201ENST00000317243 CER1O95813 267 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 B4GALT1P15291 398 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 SLC23A3Q6PIS1 610 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 SSC4DQ8WTU2 575 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 CT55Q8WUE5 264 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 DYRK2Q92630 601 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 ARRDC1-AS1Q9H2J1 176 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 TCFL5Q9UL49 500 aa16.76■□□□□ 0.27
ZNF554-201ENST00000317243 RAB4BP61018 213 aa16.75■□□□□ 0.27
ZNF554-201ENST00000317243 TAF9Q16594 264 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms