RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HIST1H2BBP33778 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BDP58876 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BCP62807 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 FOXO1Q12778 655 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 ARL6IP1Q15041 203 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 OR1C1Q15619 314 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST2H2BEQ16778 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BHQ93079 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 LYZL4Q96KX0 146 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 OXGR1Q96P68 337 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BNQ99877 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H2BMQ99879 126 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 GPR61Q9BZJ8 451 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 DECR2Q9NUI1 292 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 CEP250Q9BV73 2442 aa14.85□□□□□ -0.03
SCAMP4-201ENST00000316097 TGIF2-C20orf24A0A0A6YYL0 155 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 CXorf65A6NEN9 183 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 DUSP1P28562 367 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 ALDH3B1P43353 468 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 ERVFRD-1P60508 538 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 H3F3AP84243 136 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 IL13RA2Q14627 380 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 MYO7BQ6PIF6 2116 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 DTX1Q86Y01 620 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 OR2G3Q8NGZ4 309 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 FAM166BA8MTA8 275 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 SEC14L6B5MCN3 397 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 HIST1H1BP16401 226 aaKnown RBP14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 RAC1P63000 192 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 DLK1P80370 383 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 EWSR1Q01844 656 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■■□□ 17.5
SCAMP4-201ENST00000316097 PHYHD1Q5SRE7 291 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 RTL6Q6ICC9 239 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 SSX9Q7RTT3 188 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 FAAP24Q9BTP7 215 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 LIPGQ9Y5X9 500 aa14.84□□□□□ -0.03
SCAMP4-201ENST00000316097 HSD17B6O14756 317 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 SOD3P08294 240 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 WT1P19544 449 aaPredicted RBP14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 SRD5A2P31213 254 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 CSNK1A1P48729 337 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 NUBP1P53384 320 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 CLDN15P56746 228 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 RND3P61587 244 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 LIAT1Q6ZQX7 453 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 SMDT1Q9H4I9 107 aa14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 UNKLQ9H9P5 680 aaKnown RBP14.83□□□□□ -0.03
SCAMP4-201ENST00000316097 ZNF587BE7ETH6 402 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 F5H5K5 113 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 PPP1R2P9O14990 202 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 CYB5BO43169 146 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 CA11O75493 328 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 QDPRP09417 244 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 ATP6V0CP27449 155 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 GAMTQ14353 236 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 PPA1Q15181 289 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 RSU1Q15404 277 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 SPSB3Q6PJ21 355 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 MEGF10Q96KG7 1140 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 C18orf12Q96KH6 178 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 ZNF581Q9P0T4 197 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 AK3Q9UIJ7 227 aa14.83□□□□□ -0.04
SCAMP4-201ENST00000316097 FAM24AA6NFZ4 105 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 ZNF726A6NNF4 738 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 TRGC2P03986 189 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 SRP19P09132 144 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 NTF4P34130 210 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 RBP2P50120 134 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 NKX6-1P78426 367 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 SRYQ05066 204 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 RSPO4Q2I0M5 234 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 SLC25A47Q6Q0C1 308 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 SLC16A14Q7RTX9 510 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 ZNF429Q86V71 674 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 GTF3AQ92664 365 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 ASCL3Q9NQ33 180 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 SLC2A9Q9NRM0 540 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 NECAP2Q9NVZ3 263 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 CXCL13O43927 109 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 GNMTQ14749 295 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 TAF9Q16594 264 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 KHDC3LQ587J8 217 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 TMPRSS7Q7RTY8 843 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 GGNQ86UU5 652 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 CYB561D1Q8N8Q1 229 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 OR2M7Q8NG81 312 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 OR11L1Q8NGX0 322 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 DYRK2Q92630 601 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 BOD1Q96IK1 185 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 ZNF845Q96IR2 970 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 SUCNR1Q9BXA5 334 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 BCO1Q9HAY6 547 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 TMED3Q9Y3Q3 217 aa14.82□□□□□ -0.04
SCAMP4-201ENST00000316097 ATXN7O15265 892 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-201ENST00000316097 OMGP23515 440 aa14.81□□□□□ -0.04
SCAMP4-201ENST00000316097 MAGEA5P43359 124 aa14.81□□□□□ -0.04
SCAMP4-201ENST00000316097 NOVA1P51513 510 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-201ENST00000316097 ZNF133P52736 654 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms